Gene Acid345_1562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1562 
Symbol 
ID4068671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp1910902 
End bp1911408 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content59% 
IMG OID637983571 
Productdual specificity protein phosphatase 
Protein accessionYP_590638 
Protein GI94968590 
COG category[T] Signal transduction mechanisms 
COG ID[COG2453] Predicted protein-tyrosine phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.257476 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00837584 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTGTCTC CACTCTTTGC AATCGAAGGT CCCTGGTCCG GTGTTCTCGC CATCGCTCCT 
GCACCACCAC CCGAACCACG CCTCGTAAGA GCCCTCGAAC GTTGGCAGAA GATTGGCATC
ACAACGATCC TCTCGCTCCT CACCCCCGGC GAACGTCCCG GCTGGGACAA CGAAGGCGAA
ATCTGCAACG AACTCGACAT TAACTTCTAT TCCCTTCCCA TTCGCGACCA CTCCGTCCCC
AGGCCCGACG AAATGCAAAA AGTCGTAGAC GTTCTCACCA AAGTCGAAGC CCGCCTCAAA
GCCGGCGAAC GCGTCGTCGC CCACTGTTTC GCCGGAATCG GGCGCTCCGG CATAGCCACC
GTCGGTTTGC TCATGATTGC CGGCATCCCC ATGGAAGACG CGATTGACCG AGTCAGTTTG
GCCCGCGGCC TCAATTGTCC AGAGACCGAA GAGCAGCTCG AGTGGCTCGC CTCGTTTGAC
CGCTATCGCC GCCTCTCATA CACTTAA
 
Protein sequence
MLSPLFAIEG PWSGVLAIAP APPPEPRLVR ALERWQKIGI TTILSLLTPG ERPGWDNEGE 
ICNELDINFY SLPIRDHSVP RPDEMQKVVD VLTKVEARLK AGERVVAHCF AGIGRSGIAT
VGLLMIAGIP MEDAIDRVSL ARGLNCPETE EQLEWLASFD RYRRLSYT