Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1562 |
Symbol | |
ID | 4068671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 1910902 |
End bp | 1911408 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637983571 |
Product | dual specificity protein phosphatase |
Protein accession | YP_590638 |
Protein GI | 94968590 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2453] Predicted protein-tyrosine phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.257476 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00837584 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTGTCTC CACTCTTTGC AATCGAAGGT CCCTGGTCCG GTGTTCTCGC CATCGCTCCT GCACCACCAC CCGAACCACG CCTCGTAAGA GCCCTCGAAC GTTGGCAGAA GATTGGCATC ACAACGATCC TCTCGCTCCT CACCCCCGGC GAACGTCCCG GCTGGGACAA CGAAGGCGAA ATCTGCAACG AACTCGACAT TAACTTCTAT TCCCTTCCCA TTCGCGACCA CTCCGTCCCC AGGCCCGACG AAATGCAAAA AGTCGTAGAC GTTCTCACCA AAGTCGAAGC CCGCCTCAAA GCCGGCGAAC GCGTCGTCGC CCACTGTTTC GCCGGAATCG GGCGCTCCGG CATAGCCACC GTCGGTTTGC TCATGATTGC CGGCATCCCC ATGGAAGACG CGATTGACCG AGTCAGTTTG GCCCGCGGCC TCAATTGTCC AGAGACCGAA GAGCAGCTCG AGTGGCTCGC CTCGTTTGAC CGCTATCGCC GCCTCTCATA CACTTAA
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Protein sequence | MLSPLFAIEG PWSGVLAIAP APPPEPRLVR ALERWQKIGI TTILSLLTPG ERPGWDNEGE ICNELDINFY SLPIRDHSVP RPDEMQKVVD VLTKVEARLK AGERVVAHCF AGIGRSGIAT VGLLMIAGIP MEDAIDRVSL ARGLNCPETE EQLEWLASFD RYRRLSYT
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