Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1559 |
Symbol | clpX |
ID | 4068668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 1907332 |
End bp | 1908603 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637983568 |
Product | ATP-dependent protease ATP-binding subunit ClpX |
Protein accession | YP_590635 |
Protein GI | 94968587 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.173836 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00342669 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGAGAACCA GGACTGGTAA CGAAGAAGTA CTTCGCTGTT CTTTCTGCCA TAAATCCCAG GATGCCGTCG CGAAGCTAAT CTCTTCGCCG AGCGATTATC CGCGGGCTTA CATCTGCGAC GAATGTGTCG CGGTCTGCAA TTCGATTCTC GAAGATGATC GCGCCGAAGC CAGTCCGTCG GCCGCTCCGA ACCATCTTCC CAAGCCGCTG GAAGTCAAAA CCTTCCTCGA CGAATACGTC ATCGGCCAGG ACCAGACCAA GAAGAAGCTC TCCGTCGCTG TTTACAACCA CTACAAGCGC GTTTTCATGA ATCGCCAGCG TAGCGGCGAA GTCGAACTCC AGAAATCGAA CATCCTCTTA GTCGGTCCCA CCGGAACCGG CAAAACGCTT TTGGCCCAAA CCTTGGCCAA GATGCTCGAT GTTCCCTTCG CGATTGTGGA CGCGACAACT CTCACCGAAG CCGGCTACGT CGGCGAAGAT GTCGAGAACA TCATCCTCAA GTTGCTCCAG GCTGCCGACG GCGATGTCGC CCGCGCCCAG ACCGGCATCA TCTACATCGA CGAAATCGAC AAGATCGGCC GCAAAGACGA GAACCCGTCC ATCACCCGCG ATGTCTCCGG TGAAGGCGTG CAGCAAGCGC TGCTCAAGAT TCTCGAAGGC ACCGTCGCAA ACGTTCCGCC TCAAGGCGGT CGTAAGCACC CGCATCAGGA GTTCACACCC GTCGATACGA CGAACATTCT CTTCATCGTC GGCGGCGCGT TCGTCGGCTT GGAGAAGATC GTTGGCCGTC GCCTCGGCAA GCGCGCCCTC GGCTTCCGCG ACGAGGAAAA AGAAAAGAAC TTCACCAGCG CCAACAACCG CGACTCCGAG ATGCTCCAGA GATCCGAACC GCAGGACCTC ATCAAGTTCG GTCTCATTCC CGAATTTGTC GGACGCCTCC CCGTCATGGG AGTCCTCAAC GACCTCGACG AAAACGCGCT TGTGGAAATC TTGACCAAGC CCAAGAACGC AATCGTGAAG CAGTACCAGC GCCTCTTCGA ATTTGAAAAC GTAAAGCTGA AGTTCAGTGA CGAAGCCGTC CGCGCCATCG CCCGCGAAGC CATGCAGCGA AAGGTCGGCG CCCGCGGTCT CCGCATGATC CTCGAAGAGT TGATGCTCGA CTTGATGTAT AGCTTGCCAA GCCAAAAGCG CGTCAAGGAA TTCGAGGTCA CTGCCGAAAT GGTCCAAAAA CGCGACGTCT CCATCAGCCT GATCGAGAAA CAAGCCAGCT AA
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Protein sequence | MRTRTGNEEV LRCSFCHKSQ DAVAKLISSP SDYPRAYICD ECVAVCNSIL EDDRAEASPS AAPNHLPKPL EVKTFLDEYV IGQDQTKKKL SVAVYNHYKR VFMNRQRSGE VELQKSNILL VGPTGTGKTL LAQTLAKMLD VPFAIVDATT LTEAGYVGED VENIILKLLQ AADGDVARAQ TGIIYIDEID KIGRKDENPS ITRDVSGEGV QQALLKILEG TVANVPPQGG RKHPHQEFTP VDTTNILFIV GGAFVGLEKI VGRRLGKRAL GFRDEEKEKN FTSANNRDSE MLQRSEPQDL IKFGLIPEFV GRLPVMGVLN DLDENALVEI LTKPKNAIVK QYQRLFEFEN VKLKFSDEAV RAIAREAMQR KVGARGLRMI LEELMLDLMY SLPSQKRVKE FEVTAEMVQK RDVSISLIEK QAS
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