| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1543 |
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| Symbol | |
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| ID | 4072934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 1885856 |
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| End bp | 1886683 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637983552 |
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| Product | ABC spermidine/putrescine transporter, inner membrane subunit |
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| Protein accession | YP_590619 |
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| Protein GI | 94968571 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.414706 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGA GCAGCGAGAA GCGCCCACTG TGGCTGCGCA TTCACATGAT CGCGGTCTTT
GCGTTCCTCT ATTTGCCGAT CACAATCCTG GTCATCTACT CGTTTAATGG CGGCGGTGTC
GGCGGGTTCC CGCCGCGCAA CTTCACCCTC AACTGGTACC GCATGCTGCT CGACGACGGC
GCACTCTGGG ATGCCGTGCT CAATAGCCTT GAAGTCGCGT TCGCCGCTGT CATCATCGCT
GTCAGCCTGG GCCTTCCGGC CGCGCTCGCC CTCGATCGCG TGAACTTTCC CGGCAAAGTC
CTGTTCCGTC GGCTGGTGCT TCTACCGTTG ATTCTTCCGG GCATCATTAC AGGCCTTTCG
CTGTTGATGC TCGTGGTCGC CGTGCATCTG AAGCTCAGCC TGGTAACGAT CATTCTCGGT
CACGGTACCG CTCTCATCTC CGTCGCGACG ACAGAAATCT TCGCAGGTCT GCAAAAGGCC
CAGCGCTCGC AGGAAGAAGC CTCACTCGAT CTCGGCGCGA ATTATTGGCA AACATTCTGG
CGCGTCACGC TTCCGAACCT GAAGCTTGCA ATCATCGGCG CTGCGCTGCT CATCTTCACG
CTCTCCATGG ACGAGATCGC CGTCAGCTTT TTCCTTATCG GGCGCGACAA CACTCTGCCA
CTCGAGATCT GGTCGCGCCT GCGCCGCGGC ATGACCCCCG AGATCAACGC CATTTCAACC
ATCATCTTTG TCTTTTCTCT GGCACTCATT TTGTTCTGGT ATCGCTTGCG CAAGCCCGGC
TCTGAAGAAT GGGAGACCGC GGCCCACGCC GTCGAAGGGG AAGCATGA
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| Protein sequence | MSTSSEKRPL WLRIHMIAVF AFLYLPITIL VIYSFNGGGV GGFPPRNFTL NWYRMLLDDG
ALWDAVLNSL EVAFAAVIIA VSLGLPAALA LDRVNFPGKV LFRRLVLLPL ILPGIITGLS
LLMLVVAVHL KLSLVTIILG HGTALISVAT TEIFAGLQKA QRSQEEASLD LGANYWQTFW
RVTLPNLKLA IIGAALLIFT LSMDEIAVSF FLIGRDNTLP LEIWSRLRRG MTPEINAIST
IIFVFSLALI LFWYRLRKPG SEEWETAAHA VEGEA
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