Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1541 |
Symbol | |
ID | 4072932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 1883947 |
End bp | 1885011 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637983550 |
Product | spermidine/putrescine ABC transporter ATPase subunit |
Protein accession | YP_590617 |
Protein GI | 94968569 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.959394 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.682302 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACCT CATCCGTTCC GGAAAACGTC TCAGTCGGGC AGGCGCTGCT CGCGGTGGAC TGCGTCGCCA AGCGCTTTGG AAAGAACATC GTTCTTCGAG ACGTTTCCCT TACGGTCGCG CAAGGTGAGT TCCTCAGCAT CCTCGGCGAG AGCGGTTCCG GCAAAACGAC GCTGCTGCGT CTCATCGCGG GCTTCGAGCA ACCGGACGGC GGTACCATCA CCATGGCCGG CGAGCGCATC GAGAACCTCC CGCCTTACAA GCGCCGCGTA AACACGGTCT TCCAAAGCTA CGCGCTCTTC CCACATCTCA ACGTGGAAGA GAACGTCGCC TACGGATTGA AGGTCAACAA AACTTCCAAA GGTGAAATCC CCAAGCGTGT GCAGGAAGCG CTCGCCATGG TGAAGATGGA GAGTTTCGCA AAGTCGAAAC CATCCAAGCT CAGCGGCGGA CAGCAGCAGC GGGTTGCGCT CGCGCGCGCA TTGGTAAATC GTCCCAAGCT CCTATTGCTC GACGAACCGC TGTCCGCGCT CGATGCCAAC CTGCGGCGCG AAATGCAATT CGAATTGAAA TCGCTCCAAC GCGAAGTCGG CATCGCCTTC GTCTTTGTCA CGCACGACCA GGAAGAGGCG ATGACCATGT CCGATCGCGT CGCCCTGCTG CGTTACGGAG CACTGGAGCA GATTGCCAGT CCGCGGGAAA TCTATGCCAA GCCCGCCACC GCGTATGTCG CGCAGTTCAT CGGACACAGT AACCTCTTGC GCTGTACAGT GAGCCGCGGC ATCGCTCGCT GCGGTAACCT GATGTTCACA ACCTCGGCGC CCGACGGCCC CGCGGTCTTC TCGCTCCGGC CAGAAGCAAT CCGCATCGCC AGCACGGCGA GCGATCAAGT CAGGTTCAAA GGCACCGTCG CTCGCCAGGT CTTCCAGGGC GCCACTGAGC TGTACGAACT CGACGCCGGC GGTTTTCGGC TGAATGCGAA GATCTATGGT TCGGGAGTTC CCTCGGGCGA GAGCGAATTC GAGTGTTCTC CCGCTGACAT CGTTGTCGTG AAGGAGAGCC TCTAG
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Protein sequence | MTTSSVPENV SVGQALLAVD CVAKRFGKNI VLRDVSLTVA QGEFLSILGE SGSGKTTLLR LIAGFEQPDG GTITMAGERI ENLPPYKRRV NTVFQSYALF PHLNVEENVA YGLKVNKTSK GEIPKRVQEA LAMVKMESFA KSKPSKLSGG QQQRVALARA LVNRPKLLLL DEPLSALDAN LRREMQFELK SLQREVGIAF VFVTHDQEEA MTMSDRVALL RYGALEQIAS PREIYAKPAT AYVAQFIGHS NLLRCTVSRG IARCGNLMFT TSAPDGPAVF SLRPEAIRIA STASDQVRFK GTVARQVFQG ATELYELDAG GFRLNAKIYG SGVPSGESEF ECSPADIVVV KESL
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