| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1534 |
|---|
| Symbol | |
|---|
| ID | 4072925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 1872299 |
|---|
| End bp | 1873660 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637983543 |
|---|
| Product | 4-aminobutyrate aminotransferase |
|---|
| Protein accession | YP_590610 |
|---|
| Protein GI | 94968562 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
|---|
| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.46092 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.55252 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTCAA TTGTTTTGCG AACCAAGGTT CCGGGACCGA AAGCGCTGGA GCTTGCGAGC
CGCCGATCGG CCGCGGTTCC TCGCGGTATC TACGCATCGA CGCCCATCTA TGTGTCGCGT
GCGGAAGGCG CGCTGATCGA GGATGTGGAT GGCAATACCT TCATTGACCT CGCCGGCGGC
ATCGGCGTAA TCAATGTTGG GCATCGCTCA CCTGCCGTCG TCGAAGCCAT TCATCGTCAG
ACCGACCGCT TTCTCCATAC CTGCTTTCAG GTTGTCGGAT ACGAGAGCTA CATCCGTCTT
GCGGAGAAAT TGAATGAGAT CACCCCCGGC GAATTTCCAA AGCGTACGTT CTTCGTGAAC
TCCGGCGCGG AAGCCGTCGA GAACGCGGTG AAGATCGCGC GCTATCACAC CAAACGTCCC
GCGGTTATCT GCTTTGAAGA TGCGTTCCAC GGGCGGACCA CGCTGGGGAT GGCCCTCACC
AGCAAGACGC ATCCGTACAA AGCTGGGTTC GAGCCATTCC CTAGCGAGAT TTATCGCATC
CCCTACGCGT ACTGCTATCG CTGCTCCTAT GGGAAGAAGT ATCCGAGTTG CGAAGTTGCG
TGTGCCGATG CTTTAGAAGG CGTCTTCAAG CGCACTGTGG CAGCAGAATC CGTGGCGGCG
ATCATTATTG AACCGGTGCT CGGCGAAGGT GGGTTCGTGA CCCCGCCCAG CGATTTCTTG
CGAAAGCTGC ACGGCATCTG CAAGCAGCAC GGCATCGTCT TCATCGCCGA CGAAGTACAG
ACCGGCTTCG GCCGCACCGG CGCGATGTTT GCCTGCGAGC GCTACGGCGT TGAACCGGAC
ATTTTGATCG GCGCGAAATC TCTCGGCGGT GGTTTGCCAA TTGGATCCAT CACGGGCCGC
GCAGAAATCA TGGATGCGCC CATACCGGGC GGCATCGGCG GAACGTTCGG AGGCAGTCCT
CTTGCGTGCG AAGCCGCGCT GGCAACGATT GAAGCCATGC AGCGCCAGGA TCTTCCGGCG
CGCGCTAACG CACTGGGTGA ACGCTTCCGG GCCCGTGCCC TGCGGTGGCA AGCGCAGTGG
CCGCAGATTG GCGAAGTGCG CGGCCTTGGC GGGATGCAGG CGATCGAACT GGTGCGCTCG
GCCGAGTCAC GAACTCCCAA CGACTCCGCG ACGAAGCACA TCATCCAATA TTGTTATGAG
CGCGGCGTGA TTACTCTCAA CGCGGGCACG TATAGCAACG TCATTCGCAT TCTCATGCCG
CTCGTCATTT CCGATGCGCA ATTCGAAGAA GCGCTCGACG TAATGGAATC GGCCCTCTCG
CACGAGTTTG CGACTTCTCG TGTGACTACC GGAGTTTCAT AG
|
|---|
| Protein sequence | MASIVLRTKV PGPKALELAS RRSAAVPRGI YASTPIYVSR AEGALIEDVD GNTFIDLAGG
IGVINVGHRS PAVVEAIHRQ TDRFLHTCFQ VVGYESYIRL AEKLNEITPG EFPKRTFFVN
SGAEAVENAV KIARYHTKRP AVICFEDAFH GRTTLGMALT SKTHPYKAGF EPFPSEIYRI
PYAYCYRCSY GKKYPSCEVA CADALEGVFK RTVAAESVAA IIIEPVLGEG GFVTPPSDFL
RKLHGICKQH GIVFIADEVQ TGFGRTGAMF ACERYGVEPD ILIGAKSLGG GLPIGSITGR
AEIMDAPIPG GIGGTFGGSP LACEAALATI EAMQRQDLPA RANALGERFR ARALRWQAQW
PQIGEVRGLG GMQAIELVRS AESRTPNDSA TKHIIQYCYE RGVITLNAGT YSNVIRILMP
LVISDAQFEE ALDVMESALS HEFATSRVTT GVS
|
|---|
| |