Gene Acid345_1524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1524 
Symbol 
ID4073012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp1859883 
End bp1862183 
Gene Length2301 bp 
Protein Length766 aa 
Translation table11 
GC content60% 
IMG OID637983533 
ProductCheA signal transduction histidine kinases 
Protein accessionYP_590600 
Protein GI94968552 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases
[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.82922 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCAGG TCGCCCGCAG CGGAACGGAT GGACACGACG GCATGAGCGA AATGGACGAG 
ATCGTCAAGG AATTCCTGGT CGAGAGCAAC GAAGGACTCG ATCAGCTGGA CCGCGACCTG
GTGGCATTGG AGAAGGACCC GGAAGAAAAG GACCTGCTGG CCTCAATCTT CCGTGCGATC
CACACCGTGA AGGGAACGAG CGGGGTGCTG GGTTTCCCGA AGATCGAGTC GGTGGCCCAC
GTGGGGGAGA GCCTGTTGAG CCGGTTGCGT GACGGCAAGA TGCGGCTCGA TCCGCAAATC
ACAAGTGGAT TGCTGGCGAT GGGGGACGTA CTGCGGGAAC TCCTCGGAAA CATTGATGCG
TTGGGAGTCG AGGGCGATCG CAATGTAGAG CCGGTGGTGA CGCGGCTGTC GGCCTTGCTG
GAGAGGACCG ATTCCTCGAA GGCGGCAGAC GCGGCGACCG CCGACACTGC GCCCGAGGCG
CGGAAGAAGA CGACAAAGCG CGTTGCAAAG AAGCGGTCTA AGGCGGCCGT AGAACCGTTG
AGCGTGGCGG AGGCGTCGCC CGCACCTGCG TCGACATTGG CGGCGGACGA AGCCGCGCAA
TCTGGCGCGA ATTTGGAGAC CAGTGAAGCG CGGGGCCCAG CGGTGTCGGC CAATAACATC
CGCGTGGATG TTGGTCTGCT CGACAAGATG ATGAACCTGG TCGGGGAACT GGTGCTGGCG
CGCAACCAGA TCCTGCAATA CACGGGAAGC CAGCAGGACA GCGGATTTGT CAGCGCCGCG
CAGCGGCTGA ACCTGATCAC GACCGAGTTG CAAGAGAGCG TGATGAAGAC GCGGATGCAG
CCAATTGGGA ACATCTGGAA CAAGCTGCCG CGGCTGGTGC GCGATTTGGC GTTGTCGTGC
GGAAAACAAG TACGAGTGGA GATGGACGGG GCCGAGACCG AGCTCGATAA AACGATTATC
GAGGCGATCA AGGACCCATT GACGCACATC GTGCGCAACG CCGTGGATCA CGGTCTCGAG
ATGCCGGAGG AGCGTCGCTC GACGGGCAAA GAAGCAGAGG GAAGGCTGCT GCTGCGCGCG
TATCACGAAG GCGGGCAGGT GAATATCGAG ATTAGCGACG ACGGTAAGGG TGTTGATCTC
GAGGCAGTCC GCGAAAAGGC GCGGCAGCGC GGACTGGTAA GTGCGGAACA AGCGGCACGG
ATGAGCGAGC GTGAGCTGCT CAATGTGCTA TTCCTGCCGG GATTCTCAAC CGCGAAACAG
GTTACCAACA TTTCCGGCCG CGGTGTCGGG ATGGACGTGG TCAAGACGAA CATCGAGAAG
ATTGGCGGCA CGGTTGATCT GCAAAGCGTG GAGGGGAAGG GAACAGCGCT GAAGATCAAG
ATTCCGCTGA CACTGGCCAT CATTCCCGCG CTGATTGCCA CGAGTGGTGG CGAGCGCTTC
GCGATTCCGC AAGTGAGCCT GCTGGAACTG GTGAGGCTCG AAGGCGATGG AGTTGGAAAA
GGGATTGAGT ACATCCACGG AGCGCCGGTA TACCGCCTGA GAGGGAGTTT GCTGCCCCTG
GTGTCCTTGA ACGGCGTGCT CGGCCTCGAC CGTAAGAAGC AACAGGAGAT CGCGAACATC
GTGGTATTGC AGGCCGACGA CCGGACCTTT GGGTTGATCG TGGACGAGAT CAACGACACC
GAAGAGATTG TCGTGAAACC CCTCAGTAAT CTGCTGAAAG GCCTGCTCTG TTTTGCCGGG
GCGACGATTA TGGGAGACGG TACGGTAGCG TTGATCCTCG ACGTGATGGG ACTCGCACAA
CAGGCGAGCG TAGTGACGGA GTTGCGTGAC CGTGCGGTGA AACAGATGCA CGCCCGCAAC
GAAGACGGCC GGATGGAGTC GGAGGCATGG CTGTTGACTC GGGTGGGCGA GGAAGGCCGC
ATCGCTGTGC CGCTCTCGAA CGTCAATCGG CTCGAAGAGT TCAAGCTTTC GAGCGTGGAG
CACTCCGGGG GACTCGAGGT GGTGCAATAC CGCGGACAGA TCATGCCGCT GGTACGGTTG
TCGCAACTTC TCAACCTTCC GGGAACGGAC GCCGGCGAAG TATTGCCGGT CATTGTCACT
TCACAACAGG GCCGGAGCCT TGGATTGGTC GTGGACAAAA TTGAGGATGT GACCGAACAA
CAGATCGCAG TGAACCGTTC CAACGATCGG ATGTACTTGC AAGGCTCCGC GGTGCTGCAA
CAACGCGTCA CCGACTTGCT CGATGTGCAT GCGGTGATGG CGTCTGTGTG CACTGAATTC
AAGGAGGTCG TGAATGCCTG A
 
Protein sequence
MVQVARSGTD GHDGMSEMDE IVKEFLVESN EGLDQLDRDL VALEKDPEEK DLLASIFRAI 
HTVKGTSGVL GFPKIESVAH VGESLLSRLR DGKMRLDPQI TSGLLAMGDV LRELLGNIDA
LGVEGDRNVE PVVTRLSALL ERTDSSKAAD AATADTAPEA RKKTTKRVAK KRSKAAVEPL
SVAEASPAPA STLAADEAAQ SGANLETSEA RGPAVSANNI RVDVGLLDKM MNLVGELVLA
RNQILQYTGS QQDSGFVSAA QRLNLITTEL QESVMKTRMQ PIGNIWNKLP RLVRDLALSC
GKQVRVEMDG AETELDKTII EAIKDPLTHI VRNAVDHGLE MPEERRSTGK EAEGRLLLRA
YHEGGQVNIE ISDDGKGVDL EAVREKARQR GLVSAEQAAR MSERELLNVL FLPGFSTAKQ
VTNISGRGVG MDVVKTNIEK IGGTVDLQSV EGKGTALKIK IPLTLAIIPA LIATSGGERF
AIPQVSLLEL VRLEGDGVGK GIEYIHGAPV YRLRGSLLPL VSLNGVLGLD RKKQQEIANI
VVLQADDRTF GLIVDEINDT EEIVVKPLSN LLKGLLCFAG ATIMGDGTVA LILDVMGLAQ
QASVVTELRD RAVKQMHARN EDGRMESEAW LLTRVGEEGR IAVPLSNVNR LEEFKLSSVE
HSGGLEVVQY RGQIMPLVRL SQLLNLPGTD AGEVLPVIVT SQQGRSLGLV VDKIEDVTEQ
QIAVNRSNDR MYLQGSAVLQ QRVTDLLDVH AVMASVCTEF KEVVNA