Gene Acid345_1517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1517 
Symbol 
ID4073005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp1852413 
End bp1853204 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content62% 
IMG OID637983526 
Producthypothetical protein 
Protein accessionYP_590593 
Protein GI94968545 
COG category[R] General function prediction only 
COG ID[COG1512] Beta-propeller domains of methanol dehydrogenase type 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.413483 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.437621 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCGTT ACACCATTCG GCTCTTTGAG CTGACCCTCG TCCTGCTCGC GGCGCTCGTG 
TGCGCGGCGG ACCCGATCAA GTCGCTGAAG GCCACTGGAT ATGTGAACGA CTTTGCCGGC
GTGCTGCAGC CGGACACGAT CCAGAAGCTC GAAGCACTGT CTACGGAGAT TGATCAGAAG
ACCGGGGCGC AGATCGCGAT TGTGACCGTG AAGTCGCTCG ATGGCGACGA CATTGATAAC
TATGCGGTGG CGCTGTTCAA GGAATGGGGC GTCGGGGCGA AGAAGAGCGA TCGCGGCGTG
CTCGTCCTGA CGGCGGTGGA CGATCGGAAG TATCGCATTG AGGTTGGCTA TGGATTGGAG
CCGATTTTGC CGGATGGCAA GGTCGGTGGC TTCGGACGAG AAGCAGTGCC GCTCTTCAAG
AGTGGCGACT ATTCCGGCGC TGTCACGCTG ATGACCGACC GGGTGGCGCA GGTGATTGCC
GAGGATGCGA AGGTGACGCT GGCGGACATG CCTGCCGCGC CCAAGCCGAG ACGCCACGAA
GGGTTCAACA TCCCGATTTT CTGGATCTTT ATCATCGGCT CGTTGATCTT CCATTCCATC
GGCTATCTGA TTCGGCGGAT CCGTCATGGT AGTTCCGCAC GCTGGGGTGG CGGGGGCGGG
CCAGGCTTCT GGATGGGTGG TGGAGGCTTC GGCGGGGGCG GTGGTTGGAG CAGCGGCGGT
GGTGGCGGGG GAGGCTTCGG TGGATTCGGC GGTGGCAGCT CAGGTGGAGG TGGCGCAAGT
GGCGGTTGGT AA
 
Protein sequence
MLRYTIRLFE LTLVLLAALV CAADPIKSLK ATGYVNDFAG VLQPDTIQKL EALSTEIDQK 
TGAQIAIVTV KSLDGDDIDN YAVALFKEWG VGAKKSDRGV LVLTAVDDRK YRIEVGYGLE
PILPDGKVGG FGREAVPLFK SGDYSGAVTL MTDRVAQVIA EDAKVTLADM PAAPKPRRHE
GFNIPIFWIF IIGSLIFHSI GYLIRRIRHG SSARWGGGGG PGFWMGGGGF GGGGGWSSGG
GGGGGFGGFG GGSSGGGGAS GGW