| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1516 |
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| Symbol | |
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| ID | 4073004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 1850053 |
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| End bp | 1852332 |
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| Gene Length | 2280 bp |
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| Protein Length | 759 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637983525 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_590592 |
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| Protein GI | 94968544 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1449] Alpha-amylase/alpha-mannosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.757577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.533903 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCGCG ATTCCAAGAT TTATCTCGTG CTCCTCTGGC ACATGCACCA GCCTTTTTAC
AAGGACCTCG TCTCCGGGGA ATACCGGCTG CCGTGGGTCC GAATGCATGC ACTCAAGGAT
TACTACGGCA TGGTGAAGTT GCTGGACGAA TTCCCGAACG TCCACCAGAA CTTCAATCTT
GTGCCGTCGT TGTTGGAGCA GTTGCAGGAT TATGCGGCGG GAACGGCCCG CGATCCGTTT
TATGAGATCG TGGCGAAGCC GGCGGCGCAG TTGGGCGATG CGGGGAAGCG GTTCGCGCTG
CAGTATCTGT TCCAGGCGAA TCCGGACCAC ATGATTGGGC GCTATCCGCG CTATCGAGAA
TTGTTTCAAC GCTATTTGCA GTTGAGTGGG CGGGAGCATC CGGAGCAGCG GTTCGACAAC
CAGGACATTA CCGATCTGCA AGTGTTGTCG CAGGTGGCAT GGTTCGATGA GTTCTTCCTG
GAGCGGCCAG AGATCAAAGC GCTGGTTGCG AAAGGGAGCG GATTTACGGC GGACGATCAG
CGGACGATGC TGCTTATGCA GCGCGAGATT ATTTCCGCGG TGATCCCGGC TTATGTGGAG
GCGGCGAAGA AGGGGAGTAT CGAGATTTCG GCGACGCCGT ACTATCACCC GATTTTGCCG
CTGATTTGCG ATACGTATGC GGGCGAGGAG TCGTCGCCGG GGCTGCCGAT GCCGCAGGCA
CGCTTTCAGA GGCATGACGA TGCGGAAGAG CAGATCGTGC GCGCTCTGGA TTATCACGAG
AAACTGTTTC ATCATCGACC GGCTGGATTG TGGCCGAGCG AGGGCAGCGT TTCGGAAGAA
GCGATTGCGA TTGCGGCGGG CGCGGGCGTG CAATGGATGG CCACCGATGA AGGTGTGCTC
GGCCGCACGC TGGGGAAATT CTTCGAGCGG GACTTGAAGG GCCAGCTCAA CGACGAGAGC
GCCAGAGACC TGTTCAAGAT TTATCGCTAC GAGAAGAGCG GGAAGCGGAT GCACATGGTG
TTCCGCGACC ATCGGCTATC GGACCTGGTT GGATTCGTGT ATCAGAACAT GCCGGCAGCG
GATGCAGCAC AGCATCTGCT GACGAGCATC CATCTCTCGG CGCGGCCGGT TTTGGAGAGC
GGGCGCGATG CGGTGATTCC GATCATTCTC GATGGGGAGA ATGCGTGGGA GTCGTATCCG
AAGAATGGGC GCGAGTTCCT GCGGCGGTTC TACGATGGGA TTCAGAACGA TCCGCGCATT
GAGGCGCTGA CGATCAGCGA GGCGATTGCG CGAACTAACG ACGAAGACTT TGGAAGACTC
GATCATCTTG TGCCGGGATC GTGGATCAAC GCGAACTTCA ACGTGTGGAT TGGCGCGCCG
GAAGACAACA AAGCGTGGGA CCATCTTTCA GCGGCGAGGC GCTTCTTCGA CGAGAACGCG
CACAAGGTCA ACGAAGAGCA ACGCGAACTC GCGTATGAAG AATTGCTGAT CGCTGAGGGC
AGCGACTGGA ACTGGTGGTA TGGGCCAGAA CACCACTCGG CAAACGATCG TGATTTTGAC
GAGCTGTACC GTAAGCACTT GTCGAACGTG TACCAGGCAC TTGGGGCGTC GGCGCCGGAT
GAGTTGGCGC AGCCGATCAT TACGGGCACT GTGCGGCCGA TGCTGGTGCC GCAGACAGCG
TATATCCACC CCACCGTAGA TGGGCGCGAG GCAGGTTACT TCGATTGGAT GGGCGCGGCG
ATGTACACCG CGGACCGGCG GACGAGTTCG ATGCACGGGA AGCAGTTCTT CCTGGACGCG
ATCTACGCGG GCGTGGATGA GAACTACTTG TACGGGCGAT TGGATTTCGC GGGCGAAGTT
CCGCCGGCGG GCGTGTACAG GGTGATTGCC AACATCGAGG TCATCCACGA CGAGAAGACA
ACTTCGTTCC GCTTGATTGC CGATGCGCAG GGGAGCGACT TGCGGACATG GAGCGTGACG
AACGGCGAAG AGCGTCATGT GCTGGCGAGT TCCGACCTCA CTGGCGGCAG CGCGAACCTG
ACGTGCGCGG CCGATCCCGA AGCGCAGGAG ATCAAAGTAG CGATCGGAAA GCTGCTGGAA
TGCCGGCTTC CGCACAAGAT TCTCGGGGCG AGGCATGGGG ATCGGATGCG CATCCGATTC
AGTCTGTGGC GAGAGAAGTT GCCGCTCGAC GCACTTCCAG TTGAGGGATG GCTCGATTTG
CGGCTCTGCT CGGACTCAGA GCTGGAAGAA AACACTTACA ACTACACTGC AGAAGCGTAA
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| Protein sequence | MSRDSKIYLV LLWHMHQPFY KDLVSGEYRL PWVRMHALKD YYGMVKLLDE FPNVHQNFNL
VPSLLEQLQD YAAGTARDPF YEIVAKPAAQ LGDAGKRFAL QYLFQANPDH MIGRYPRYRE
LFQRYLQLSG REHPEQRFDN QDITDLQVLS QVAWFDEFFL ERPEIKALVA KGSGFTADDQ
RTMLLMQREI ISAVIPAYVE AAKKGSIEIS ATPYYHPILP LICDTYAGEE SSPGLPMPQA
RFQRHDDAEE QIVRALDYHE KLFHHRPAGL WPSEGSVSEE AIAIAAGAGV QWMATDEGVL
GRTLGKFFER DLKGQLNDES ARDLFKIYRY EKSGKRMHMV FRDHRLSDLV GFVYQNMPAA
DAAQHLLTSI HLSARPVLES GRDAVIPIIL DGENAWESYP KNGREFLRRF YDGIQNDPRI
EALTISEAIA RTNDEDFGRL DHLVPGSWIN ANFNVWIGAP EDNKAWDHLS AARRFFDENA
HKVNEEQREL AYEELLIAEG SDWNWWYGPE HHSANDRDFD ELYRKHLSNV YQALGASAPD
ELAQPIITGT VRPMLVPQTA YIHPTVDGRE AGYFDWMGAA MYTADRRTSS MHGKQFFLDA
IYAGVDENYL YGRLDFAGEV PPAGVYRVIA NIEVIHDEKT TSFRLIADAQ GSDLRTWSVT
NGEERHVLAS SDLTGGSANL TCAADPEAQE IKVAIGKLLE CRLPHKILGA RHGDRMRIRF
SLWREKLPLD ALPVEGWLDL RLCSDSELEE NTYNYTAEA
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