Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1511 |
Symbol | |
ID | 4069258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 1842514 |
End bp | 1843167 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637983520 |
Product | putative cyclase |
Protein accession | YP_590587 |
Protein GI | 94968539 |
COG category | [R] General function prediction only |
COG ID | [COG1878] Predicted metal-dependent hydrolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.3685 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.674616 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATGACA AAAAGTTGAT CGATCTGAGC CATACGGTGG AGCAGGGCGT GGTGACCTAC AAAGGATTGC CGGCGCCGGT GATGTGCGAT TTTTTGAGCC GCGAGGACTC GCGGGAAATT TACGCGGAGG GAACGGAGTT TCAGATCGGC AAGATCGAGA TGGTCGCGAA TACGGGGACG TATGTGGACA GTCCATTTCA TCGATTTGCG GATGGTTGCG ATCTTTCTGA ACTGAGACTG GAGCAGTTGG CGGATTTGGA GAGTGTCGTA GTGCGAGTAT CCGGACGAAG GGTGCCGGCC TCGGCGTTTG CGGATTTGGA TGTGCGCGGG AAGGCGGTGC TGGTGCATAC GGGGTGGGCA CGGCACTGGG CGACGGAACA GTACTTCGAG GGGCACACGT TTCTTGCCGA AGACGCGGCG GTGTGGTTGC GCGATGCGGG AGCGGTTCTC GTGGGGATCG ATTCTTACAA CATTGATGAC ACGAATGACG GACGGCGTCC GCTGCATACG ACGTTGCTCG GTGCGGGGAT TCCGATCTGC GAACACATGT GCAATCTGGA GGCGCTGCCG GAGAGTGGAT TTCGATTTAG CGCGGTGCCG GTGAAGGTGA AGGGGATGGG AACGTTTCCG GTGAGGGCCT GGGCTGCAAT CTAA
|
Protein sequence | MNDKKLIDLS HTVEQGVVTY KGLPAPVMCD FLSREDSREI YAEGTEFQIG KIEMVANTGT YVDSPFHRFA DGCDLSELRL EQLADLESVV VRVSGRRVPA SAFADLDVRG KAVLVHTGWA RHWATEQYFE GHTFLAEDAA VWLRDAGAVL VGIDSYNIDD TNDGRRPLHT TLLGAGIPIC EHMCNLEALP ESGFRFSAVP VKVKGMGTFP VRAWAAI
|
| |