| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1500 |
|---|
| Symbol | |
|---|
| ID | 4069247 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 1825548 |
|---|
| End bp | 1826894 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637983509 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_590576 |
|---|
| Protein GI | 94968528 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.21091 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAAC CGCGCCGCAA TTTTTGGCAG ATCGTGAACA TGAGCGTTGG CTTTTTGGGG
ATCCAGTTCG GATGGAACCT GCAGATGGCC AACATGAGCG CCATCTATGA GTATCTCGGT
GCGCGAGCGG ACCAGATTCC GATTTTGTGG CTCGCGGCGC CGCTCACCGG GCTCATCGTG
CAGCCGCTCA TCGGGCACGC AAGCGATCAC ACATGGGGCA AGCTCGGCCG CCGGCGTCCA
TATTTTCTAA CCGGCGCGAT TCTCAGTTCG CTGGCGCTGA TCCTGATGCC GCGCTCGGGC
GCGCTATGGA TGGCCGCGGG GCTGCTTTGG ATTCTCGACG CGTCGATCAA CATCAGCATG
GAACCGTTCC GCGCATTCGT CGCCGACATT CTTCCGGAAG AACAACGCAC CCGTGGCTTC
GCGATGCAGA GCCTGATGAT CGGTCTTGGC GCGGTGATGG CGAACGTTCT CCCCTACCTG
CTGCTGAAGT TCGGAAACTT GAAGGCCGAC ACGACGGGAT ATGCGATTCC ACTCGCAGTG
CGAATCTCGT TCTACGTCGG CGCGGCTGCA TTCTTCGGCG CGGTAATGTG GACGATCCTG
ACGACGAAGG AGTATCCACC GGACGATCTG GAAGCCTTCC GAAAGAAGAA AGAAAAAAAG
GGCGGCTTGG GATTGGGAGA GATCGTCAAC GCGGTTCGCG AAATGCCCAT GACGATGCGG
CAACTGGCGC CGGTACAGTT CCTTACCTGG CTCGGACTGT TTTGCATGTG GCTGTTCTTC
GGCGTTGCGG TAGCGCGCAA TGTGCTCGGC GCTACCGATG CGAAATCGAA GCTCTACACC
GATGGCATCG CGTGGGGCGG CATCTGCTTT GCGTTCTATT CCGGGGTCAC GTTTGTCTAT
TCGTTTTTCC TGCCCGCAAT TGCAAAGGCC GTTGGACGCC GGCGCGCGCA TAGCCTCTCT
CTGCTTTGCG GCGCGGCAGG ACTGATCTCA GTCGCGTTTA TTCACGACAA GAACTTTTTG
CTGCTCTCGA TGGTCGGCGT CGGCATCGCG TGGGCGAGCA CTCTCGCAAT GCCGTACTCG
ATCCTTGCCG CTTCCCTGCC GCCGGAGCGC ACCGGCGTGT ACATGGGCAT CTTCAACTTC
TTCATCGTGA CGCCAGAAAT TATTGCCTCG CTTGTTTTTG GCTGGGTGAT GGTGCACTGG
CTCAACAATA ATCGCTTATA CGCGGTGATT GCCGGAGGAG TGTTCATGAT TGCGGCAGCG
ATCATGATGC AATTTGTGAC CGATCCAGCG GAGAAGAAGG TACGCGCCAC GGAACCGGAG
GCGGTTGTGG CGAGTCGCAG GGGTTGA
|
|---|
| Protein sequence | MDKPRRNFWQ IVNMSVGFLG IQFGWNLQMA NMSAIYEYLG ARADQIPILW LAAPLTGLIV
QPLIGHASDH TWGKLGRRRP YFLTGAILSS LALILMPRSG ALWMAAGLLW ILDASINISM
EPFRAFVADI LPEEQRTRGF AMQSLMIGLG AVMANVLPYL LLKFGNLKAD TTGYAIPLAV
RISFYVGAAA FFGAVMWTIL TTKEYPPDDL EAFRKKKEKK GGLGLGEIVN AVREMPMTMR
QLAPVQFLTW LGLFCMWLFF GVAVARNVLG ATDAKSKLYT DGIAWGGICF AFYSGVTFVY
SFFLPAIAKA VGRRRAHSLS LLCGAAGLIS VAFIHDKNFL LLSMVGVGIA WASTLAMPYS
ILAASLPPER TGVYMGIFNF FIVTPEIIAS LVFGWVMVHW LNNNRLYAVI AGGVFMIAAA
IMMQFVTDPA EKKVRATEPE AVVASRRG
|
|---|
| |