| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1476 |
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| Symbol | |
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| ID | 4071646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 1785520 |
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| End bp | 1787112 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637983485 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_590552 |
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| Protein GI | 94968504 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAGTG CTGCTGTCCA GCAGCAGGAG GCGTCTGCCA CAAGTCCGTG GTTGATTGCC
ATTGCTGTCA TGTTGGCGAC CTTTATGGAG GTGCTCGATA CCTCGATCGC CTCGGTCGCC
CTGCCACATA TCGCGGGAAG CCTTTCGGCA ACGAACGACG AAGCCACCTG GGTACTCACC
AGCTATCTCG TCGCCAACGC CATCATTCTC CCGGCGAGTA CGTGGTTTGC GCTGCGCTTT
GGTCGCAAGC GCTTCCTCAT TATCTGTATC GCTATCTTTA CCGTTTCCTC GTTTGCCTGC
GGTGCTGCCA CAAGTCTATG GATGATCCTC GCCGCGCGTG CTATCCAGGG CGCCGGAGGG
GGCGCGTTGC AGCCGCTCTC GCAGGCCATC TTGCTCGAAA GTTTCCCGCC GCAAAAACGC
GGCTTGGCGA TGGCTGTCTT CGCCCTCGGC GTCGTTGTTG CTCCGGTCCT CGGTCCAACC
TTTGGCGGCT GGCTCACCGA CACCTACTCC TGGCGCTGGG CCTTCTACAT CAACATCCCC
ATCGGAATTC TCGCTGTCTT CATGATCTTG CGTTATGTCG TCGATCCTCC GTACATCAAG
AATGCAAAGC CCGGAAGAAT CGACGCCATC GGCCTCGGCC TGCTCGCCGT TTGGCTCGGC
GCGCTTCAGA TTATTCTCGA CAAAGGGCAG GAAGTGGATT GGTGGAGTGC TACTTGGCTG
CGCTGGGCTA CCCTCGTTCT GCTCGTCACA TTCATTGCGT TTCTCTGGTG GCAATTCACA
GCCGAGAAAC CGCTGGTGAA TCTTCGCGTC TTCACGCATC GCAATTTCAC TCTGGGCTGC
ATCATGATCG GCCTCTTCGG CGCCGTGATC TACGGCATGG TCACGCTGCT GCCGCTGTTT
TATCAAGAGT TGATGGGCTA TACCGCCCTG AATGCCGGCA TCGCTGTGAG TCCCCGGGGT
GTGGGTGCAA TTGTCGCCAT GCCCATAATC GGTATCCTTA CCAGTCGCAT TGACAATCGC
TGGCTGATCG CCTTCGGCTT CGCGCTCTTC GGAATTTGCA GCATCTGGTT CGGCGAAGTC
TATCTCGGCA TCGGCCCCTG GACGTTCATC TGGGCGATCA TCCTCAGCGG ATTCGCGTCA
GGCTGCGTCT TCGTGCCGCT CTCTACCACC ACGATGGCAG GGCTCCGCAA CGAAGAGATT
GGCAACGCCA GCGGCCTCTA CAATCTCCTG CGCAATATCG GTGGCAGCAT TGGCATTTCC
ATTGTGAACA TGATTGTTGC CCGCCACTCG CAAACGCATC GCAACGATCT AGTTCACAAC
ATCTCGGCAC AGAACCCGAA CTTCCATAAC CAGTTCGGTG CGATCGCGAA CGGCCTGAAG
GACGCAGGAT CCGGCGGCAA CGGAGCGCCG CTGTGGGATT CAACCACGCG GGCGTGGGGC
GTTGTGAATG GCATGGTCGA ACGCCAAGCG CGGCTCTGGT CCTACGTTGA CGACTTCCGC
TATCTCGCGC TCGTATGTTT CGCGTGCGTG CCCCTGGTCT TCATGCTGAA GAAGGCAGTC
GCTAAAAAGG GAGCTGTGGG CGCCGCGCAC TAA
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| Protein sequence | MSSAAVQQQE ASATSPWLIA IAVMLATFME VLDTSIASVA LPHIAGSLSA TNDEATWVLT
SYLVANAIIL PASTWFALRF GRKRFLIICI AIFTVSSFAC GAATSLWMIL AARAIQGAGG
GALQPLSQAI LLESFPPQKR GLAMAVFALG VVVAPVLGPT FGGWLTDTYS WRWAFYINIP
IGILAVFMIL RYVVDPPYIK NAKPGRIDAI GLGLLAVWLG ALQIILDKGQ EVDWWSATWL
RWATLVLLVT FIAFLWWQFT AEKPLVNLRV FTHRNFTLGC IMIGLFGAVI YGMVTLLPLF
YQELMGYTAL NAGIAVSPRG VGAIVAMPII GILTSRIDNR WLIAFGFALF GICSIWFGEV
YLGIGPWTFI WAIILSGFAS GCVFVPLSTT TMAGLRNEEI GNASGLYNLL RNIGGSIGIS
IVNMIVARHS QTHRNDLVHN ISAQNPNFHN QFGAIANGLK DAGSGGNGAP LWDSTTRAWG
VVNGMVERQA RLWSYVDDFR YLALVCFACV PLVFMLKKAV AKKGAVGAAH
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