Gene Acid345_1453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1453 
Symbol 
ID4071642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp1753311 
End bp1755332 
Gene Length2022 bp 
Protein Length673 aa 
Translation table11 
GC content58% 
IMG OID637983462 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_590529 
Protein GI94968481 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.376354 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCCGC GCAAAATCGC TAACCACCTT AACGGACCAG CCATGCCATT GACTGAAACT 
TCCGAAAAGG TCCTCCCCTC GGTCACCAGT TCGCTGCACA TAGCAGCGGA GACGGTTGGC
GACAAAATCT CGCCAGCCAG AGTCTGGAGT GTGCTGCTGT TCCTTGGCGG CTACTCCCTG
GCGGCGTACG GAGGACAGCA CGTCTTCGGA CAATTTGCGT TTCCATCCCC TTTCTGGCTG
CCCGACGCTG TGCTCCTCAG CGCGTTTCTT CTCACACCGA AGCGCGATTG GCTGGCCTTT
GCGCTCGCGG TCTTCCCTAT CCGGCTCGCC TTCGGACCGT CTGTCGGGAC TCCCACATGG
CTGCTCCTGT ACTCGTCGTC CATTGATGTT CTGCGCGCCT TGTTCGCGGC AACCATACTG
ACGCGAATTT TCCCGCGCGG GCTGAAACTC GACACCCTGC GTGAGTTCAC GATTTTCCTG
TCGATTGCTG CCGGGTTGGC TCCTGCCATA TCCGCGGTAT TGGGCGCCCT CGGACGTAGC
ATGCTCGGCG ATCCGTGGCT CATCACCGGG ATGCGCTGGT ATCTCGGCGA CGCCCTCGCT
CAAGCGATCT TTACTCCGGC AATCATCGCC TGGTTTTACG CCATCCGTCA GAAATCCTAT
CCCGCTTGGC GTGAATTGCT ATTGCTGTGC GCCACGACAA CGATCGTCCT CTTATATGCG
TTTCGCCTGA GCGCCGGACC GTATTCTGCG TTGATGGCCT ATGCGCCGGC GCCGTTCATC
ATCTGGGCCG CCATCAGGGT TCGTCTTATC GGGACTTCCA CCATCGTCTC GCTGGTTGCG
TGTTTGTGCA TGTTGAGCGC CGTGCTGGGA GAAGGCCTGT TCGCCGGCGG CACGGCCGCC
CAGAACCTGC TCTCGATGCA ACTCTTCCTG CTCGCGGTTT CCATTCCACT GCTTGCCCTC
TCGATCATCA TTGGCGAGCG GCAACGTACC GAAGCCGCAC TCGATAACAG TGAGGAGAAA
TTTCATAACG TTTTCCACGA GGCCGGGATC GGCATGGTCG TTGTAAGTCT GGATGGCCGT
TTTCTGGCCA CCAATGAGGC CTTCAACGAA TACCTCGGCT ACACAGAAGC AGAACTGGTC
AAAATGACCA TACACGACAT CACGCACCCC GATGACTGGG TGATGTTCTC GGAGAAGCTC
AGTCATTTGA TTGGGAACGG CGGCGGCCTG CAGCGAGTAG AAAAACGATG CATGCACAAG
AGCGGCCGCG TGGTGAACAC CGAGAGCAGC GCGTCCCTCG TCAGAGGCAT CAATGGCGAA
CCGTTGTACT TCGTCGGCGA AGTTCTGGAC GTCACGGACC GGAAGCGCGC CGAAGCTGCA
TTAGCGCAAA TGAACCAGAA ACTGATCGCG GCCCAGGAAA AAGAATGCGC GCGAATCGCG
CGCGAATTGC ATGACGACAT CAATCAGCGA ATTGCTCTGC TGGTGATTCA AATGCAATGC
ATGGCTGATG GCTCCACTGA AACGCCAAGT GAACTTCAAG AGCACATTCG GCAACTTTCA
CTTCAGGCGA CCGAGATTTC GCACGACGTG CAGGCCCTTT CCCATCGCCT GCACTCCTCC
AAACTCGAAT ACCTCGGCAT ACTGACCGCG ATCTCCGGTC ACTGTCGGGA AACCGCTGCA
CTGAATAAAG TCGATGTTAA ATTCGAACAC ACCGATCCGT TGCCGAAAAT CAGCAGCGAC
GCGGCTCTGT GTCTGTTCCG CGTTCTCCAG GAAGCCCTTC GCAATGCTGT GAAGCACAGC
CAAAGCAAGA CCTTTGCGGT GCGTCTAGCT GGGAATGAGA ACGAGATGAC GTTGAACATC
TCGGATTGCG GGATTGGCTT CGACCCCGAC TATGCCGTTA TTGGAAGCGG GCTCGGGTTG
GTGAGCATGC AAGAGCGTCT GCGCCTGGTC GGAGGAGCGT TTGCAATCGA TTCGCATCCC
GCGCGCGGCA CCACCGTACT CGCACGCGTT CCGGCAGCCT AA
 
Protein sequence
MIPRKIANHL NGPAMPLTET SEKVLPSVTS SLHIAAETVG DKISPARVWS VLLFLGGYSL 
AAYGGQHVFG QFAFPSPFWL PDAVLLSAFL LTPKRDWLAF ALAVFPIRLA FGPSVGTPTW
LLLYSSSIDV LRALFAATIL TRIFPRGLKL DTLREFTIFL SIAAGLAPAI SAVLGALGRS
MLGDPWLITG MRWYLGDALA QAIFTPAIIA WFYAIRQKSY PAWRELLLLC ATTTIVLLYA
FRLSAGPYSA LMAYAPAPFI IWAAIRVRLI GTSTIVSLVA CLCMLSAVLG EGLFAGGTAA
QNLLSMQLFL LAVSIPLLAL SIIIGERQRT EAALDNSEEK FHNVFHEAGI GMVVVSLDGR
FLATNEAFNE YLGYTEAELV KMTIHDITHP DDWVMFSEKL SHLIGNGGGL QRVEKRCMHK
SGRVVNTESS ASLVRGINGE PLYFVGEVLD VTDRKRAEAA LAQMNQKLIA AQEKECARIA
RELHDDINQR IALLVIQMQC MADGSTETPS ELQEHIRQLS LQATEISHDV QALSHRLHSS
KLEYLGILTA ISGHCRETAA LNKVDVKFEH TDPLPKISSD AALCLFRVLQ EALRNAVKHS
QSKTFAVRLA GNENEMTLNI SDCGIGFDPD YAVIGSGLGL VSMQERLRLV GGAFAIDSHP
ARGTTVLARV PAA