| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1444 |
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| Symbol | truA |
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| ID | 4071633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 1743884 |
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| End bp | 1744657 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637983453 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_590520 |
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| Protein GI | 94968472 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGCGGA ACTTCAAAAT CACGCTCGCC TACGATGGCC ACGAGTTTCA CGGCTGGCAA
ATCCAGCCCG GCAAACCGAC CATTCAAGGC ACGCTCGCCG AAACCATCGA GCGCATCACA
GGAGAGCAGA CGTTACCGCA AGGCTCAGGC CGCACCGACG CTGGTGTCCA CGCCCTGGGA
CAGGTAGCGA GCGTCGCGTT GCAAACGCCA ATCCCGGCGG ATGGGCTGCA CATCGCGCTC
AATGACAAGC TTCCGCCATC GATCCGAGCA CTAACCGTCG GAGAAGCTGC GCCGGACTTT
CACGCACGTC ATTCCGCAAA AGGGAAAACC TATCGTTACC GCATCTACCG CGCCGCAATC
TGCTCACCCT TTCTGGCGCA TTATGTGTGG CATTACCCGT GGCGGCTCGA CGAATCTGTA
ATGCAGAGTG CGACCGCGTT CATCCAAGGC GAACACGACT TCACCTCCTT TGCGGCAAGC
GATCCTGACC GGGCGCAGCG AATACGCGAC GCCGAAGACG AGGATGGGCC AAGCAACGTG
CGCACCATCT ACGACGCTGT CTGGCGCACG GAAGGCCACG AACTTATCTT CGAAGTGCGT
GGCAACGGAT TTCTTCACCA CATGGTCCGC AATCTTGTGG GAACGTTCGT GGATTTCGGC
AAGTGGCAGC ATCCTGCGGA ATCGATGGCT AAGATTTTGC GGGAAAAGTC ACGCAGCGCT
GCCGGCCCTG CAGCCCCCGC CAGCGGACTT TATCTCGTGA ATGTGGAATA CTGA
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| Protein sequence | MPRNFKITLA YDGHEFHGWQ IQPGKPTIQG TLAETIERIT GEQTLPQGSG RTDAGVHALG
QVASVALQTP IPADGLHIAL NDKLPPSIRA LTVGEAAPDF HARHSAKGKT YRYRIYRAAI
CSPFLAHYVW HYPWRLDESV MQSATAFIQG EHDFTSFAAS DPDRAQRIRD AEDEDGPSNV
RTIYDAVWRT EGHELIFEVR GNGFLHHMVR NLVGTFVDFG KWQHPAESMA KILREKSRSA
AGPAAPASGL YLVNVEY
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