Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1425 |
Symbol | |
ID | 4068804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 1724491 |
End bp | 1725306 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637983434 |
Product | AraC family transcriptional regulator |
Protein accession | YP_590501 |
Protein GI | 94968453 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.333229 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.212879 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTCC TGCACCGAAT CCCCAAGCCG CCGCTGTCGC GTTTCGTACG CGTGCTCTGG TTCTATGAGG GCTACGAGAC AGCGCACAAA AAAGAGCGGA TCCTACCCAC CGGCACCATT GAAGTCGTTT TCAATCTCAA GGAAGACATC ACGCGCGTGT ACGACCCGCG CAAGAACAAC GAATGCCTTA CGCATCGCGG CGCGTTGATC TCCGGCATGC TCACGGAATA CACGGTGATC GATACCGATG AGCAGATGCA CGTAATGGGC ATGCACTTCG CTCCTGGTGG CGCATTTCCG TTTTTCGATC TCCCGCTCAG CGAGTTCAAA GACCAGCATC TTTCTCTCGA GGATGCTTGG GGGCCTTCTG CGAACACCTT GCGCGAGCGA CTCCTAGCGC TCCCCAGCGT TGAGGCAAAA TTCGACCTGC TCGAAGCCGC GCTCATGGAA AAGATGATGG CCTTCGAACA CCACAAGGCA GTCCTCTTCG CCCTCCACGA GATGCATTCG CGACAGGCAC AAAGCATGGC CGAGCTGGTG GAGAAAATCG GCATCAGTTC GCGGCGGTTC ATCCAATTGT TCAGCGAGCA AGTCGGACTT ACGCCGAAGC TCTTCTGCCG CGTTCTGCGC TTCCAGGAAG TCGTGCACGG TATCGGCGGG AAGAGGGATG TAGACCTTGC CGACATTGCG CTGCATTGTG GCTATTTCGA CCAGGCGCAC TTCGTCCACG ATTTCAAAGC GTTTTCCGGT ATTAGCCCGA CGGAATATCT TGCCAGCCGC ACCGTGCACC TCAATCACGT GCCTCTGGCC GACTAG
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Protein sequence | MKFLHRIPKP PLSRFVRVLW FYEGYETAHK KERILPTGTI EVVFNLKEDI TRVYDPRKNN ECLTHRGALI SGMLTEYTVI DTDEQMHVMG MHFAPGGAFP FFDLPLSEFK DQHLSLEDAW GPSANTLRER LLALPSVEAK FDLLEAALME KMMAFEHHKA VLFALHEMHS RQAQSMAELV EKIGISSRRF IQLFSEQVGL TPKLFCRVLR FQEVVHGIGG KRDVDLADIA LHCGYFDQAH FVHDFKAFSG ISPTEYLASR TVHLNHVPLA D
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