Gene Acid345_1421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1421 
Symbol 
ID4068800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp1721228 
End bp1721665 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content57% 
IMG OID637983430 
Productresponse regulator receiver protein 
Protein accessionYP_590497 
Protein GI94968449 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.512888 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.112783 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGTAACC GGACCAACGA TCAACAAAAC GCAGCAAGCG GACGAAAGAT CCGCGTTGTA 
CTTGTGGACG ACTTCAAAGC CTTCCGCGAC TTCGCGGCAG GCGCCCTCAG CGCCGAAGCA
GAGATTGAAG TTGTGGCCCA GGCCGCCAGC GGCCGGGAAG GGATCGAAGC CGTGTGTGCA
CACATGCCAG ATCTAGTGGT GCTGGACATA GGACTGCCCG ATCTTTGTGG AATTGATGTG
GCCCACGTTG TGAGAAAGAG CGCTCCGCAA ACGCGGATCG TGTTCTTGAC GCAAATGTCA
ACGCCGGAAG TAATCGCTGC AGCGATGGAA ACAGGAGCGA TGGCATACGT GGTGAAGCAA
AACGCTCACT CGGATTTTCT GCGGGCCGTT CGTGCGGCTC TAGCAGGAGA GCAGTTCGTC
AGTAACACGC TGGACTAG
 
Protein sequence
MCNRTNDQQN AASGRKIRVV LVDDFKAFRD FAAGALSAEA EIEVVAQAAS GREGIEAVCA 
HMPDLVVLDI GLPDLCGIDV AHVVRKSAPQ TRIVFLTQMS TPEVIAAAME TGAMAYVVKQ
NAHSDFLRAV RAALAGEQFV SNTLD