| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1391 |
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| Symbol | |
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| ID | 4068926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 1688187 |
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| End bp | 1689314 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637983400 |
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| Product | twitching motility protein |
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| Protein accession | YP_590467 |
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| Protein GI | 94968419 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.899661 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0234159 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGTTA CTCTTAGCGA TCTGTTGAAA AAGATGTTGG AGATGCAGGG CTCTGACCTG
CACATCACCA CGAACTCGCC GCCGCAAGTG CGGGTTCACG GCAAACTGGT TCCCCTCGAC
CTGGCGCCGC TAACTCCTGC CGAAACGAAG CAGCTGGCCT ATAGCGTCAT GACTGACGCC
CAGAAGCACC GTTTCGAAGA GGACCTCGAG CTAGATTTCT CGTTCGGATT GAAGGGACTC
GCCCGTTTCC GCGCCAACTG CTTCAACCAG CGCGGCGCGT GCGGCTCCGT TTACCGCGTC
ATTCCATTCG AGATCAAGAA CTTCGACCAG CTCGGACTGC CCGCAGTCGT TTCCAAGCTC
TGCGATCGTC CGCGCGGCCT GATCCTCATC ACTGGCCCGA CCGGTTCCGG TAAGTCCACC
ACGCTCGCGG CCATGATCGA CAAGATCAAT ATTGACCGTC ACGAGCACAT CATCACCATC
GAAGATCCGA TCGAGTTCGT GCACCAGCAC AAGAACTGCC TGATCAACCA GCGCGAAGTC
CACTCCGATA CCAAGGGCTT CTCGCAGGCG CTCCGCGCCG CTCTCCGTGA AGACCCCGAC
GTGGTCCTGA TCGGCGAAAT GCGCGATTTG GAGACGATTG AATCCGCGTT ACGTATTGCA
GAAACCGGCC ACTTGACGCT GGCTACCCTG CATACCAACT CGGCAAGCTC CACCATCAAC
CGTATTATTG ACGTCTTCCC TTCGCACCAG CAGTCGCAGA TTCGCGCGCA GCTCTCGCTG
GTGCTGGAAG GCATCATGTG CCAATCGTTG TTGCCGAAGG TCGGCGGTAA CGGTCGCGCC
ATGGCCATGG AGATCCTGGT TCCGAACGCC GCTGTCCGCA ACCTCATCCG CGAAGACAAG
ATCCACCAGA TCTATTCGTC GATGCAGACC GGCCAGGACA AGTTCGGCAT GCAGACCTTC
AACCAGGCGC TGGCAACGCT GGTCGCCCAG AAACAGATCA CGATGGAACT CGCCGTGCAG
CGCTCGTCGA TGCCGGAAGA GTTGCAGGAC ATGATCGCCC GTGGACACAC CCTGCAAGGT
CGAGGGGGCA CCACAGCCGT TAATGCCGCC GCACCAACGC GGAGATAG
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| Protein sequence | MAVTLSDLLK KMLEMQGSDL HITTNSPPQV RVHGKLVPLD LAPLTPAETK QLAYSVMTDA
QKHRFEEDLE LDFSFGLKGL ARFRANCFNQ RGACGSVYRV IPFEIKNFDQ LGLPAVVSKL
CDRPRGLILI TGPTGSGKST TLAAMIDKIN IDRHEHIITI EDPIEFVHQH KNCLINQREV
HSDTKGFSQA LRAALREDPD VVLIGEMRDL ETIESALRIA ETGHLTLATL HTNSASSTIN
RIIDVFPSHQ QSQIRAQLSL VLEGIMCQSL LPKVGGNGRA MAMEILVPNA AVRNLIREDK
IHQIYSSMQT GQDKFGMQTF NQALATLVAQ KQITMELAVQ RSSMPEELQD MIARGHTLQG
RGGTTAVNAA APTRR
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