| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1390 |
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| Symbol | |
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| ID | 4068925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 1686925 |
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| End bp | 1688139 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637983399 |
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| Product | type II secretion system protein |
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| Protein accession | YP_590466 |
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| Protein GI | 94968418 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.387943 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0225351 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGTAT TTACATTCAC TGGCAAGAAC GCCACCGGCG AGAAAGTCAC CGGCGAGCGT
GTCGCCGAAA ACAAGCAGGC CCTGGCCAGC AATCTGCGGC GTGAACGAAT CCAGCCCGTC
ACCATCAAGG AGAAGGGCAA AGAATTCGTC ATGCCGACAT TTGGCGGCGG CAGCGTCAAG
ACCAAGGACA TCGCCATTTT CTTCCGGCAG TTCTCGGTCA TGATTGATGC CGGCCTCCCG
CTGGTGCAGT GTCTTGAGAT TCTCGCGGGC AACCAGGAAT CTCAAGCCTT CCAGAAGGCG
CTTAACGGCG TCCGGACAAC TGTGGAAGGC GGCTCGACCC TGGGCAACGC CATGCGTGGC
TACCCCAAGA TTTTCGACGA CCTTATGGTC AACATGGTGG ACGCCGGCGA AACCGGCGGT
ATTCTCGACA CCATTCTTCA GCGTCTCGCG ACCTATGTAG AAAAGGCCGT GAAACTGAAG
GCGGCCGTCC GCTCGGCGTT GATCTACCCG GTCTCGGTCA TCACGATTGC GGTTTTGATC
GTCGGCCTGC TGCTGTGGAA GGTCGTCCCG ATTTTCGCCA ACCTCTTCGT TGGCCTCGGT
GCTCCCCTTC CCCTGCCTAC GCGAATCGTC ATCGGCATCA GTAACTTCCT CGGAAGTTTC
TGGTGGATGG TGCCGATCAT GGTAGCTGCC GTGTTCTTCG GAGTCCGTGC ATTGCGCTCC
GACCCGCGTG GCCGCTACTT GACCGACAAT TTTCTGCTCC ACATTCCGAT TATCGGCATG
CTGCTGCGTA AGATCGCCGT CGCCCGCTTC ACCCGTACCC TGGGCACGCT GATCACCTCC
GGCGTTCCGA TTCTCGAAGG CTTGAACATC ACCGCCCGCA CCTCCGGTAA CCGCGTGGTG
GAAGAAGCGC TCTACAAGGT CCGCAAGTCG ATCGAAGAAG GCCGCACCAT CGTCGATCCG
CTTCGCGAAT CCGCTGTCTT CCCCAACATG GTTACGCAGA TGATCGGCGT CGGTGAGGCC
ACCGGTGCAA TGGATGCCAT GCTCCAGAAG ATCGCGGACT TCTACGAAGA CGAAGTGGAC
GCCGCGACCA AGGACTTGCT GACGTTGCTC GAACCCATCA TGATCGTGTT GCTCGGCATC
ATGATCGGCG GCGTAGTCGT TTCGTTGTAC CTGCCGCTCT TCTCGATGGT GGCGAAGCTC
TCCGGCGGCG GTTAA
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| Protein sequence | MPVFTFTGKN ATGEKVTGER VAENKQALAS NLRRERIQPV TIKEKGKEFV MPTFGGGSVK
TKDIAIFFRQ FSVMIDAGLP LVQCLEILAG NQESQAFQKA LNGVRTTVEG GSTLGNAMRG
YPKIFDDLMV NMVDAGETGG ILDTILQRLA TYVEKAVKLK AAVRSALIYP VSVITIAVLI
VGLLLWKVVP IFANLFVGLG APLPLPTRIV IGISNFLGSF WWMVPIMVAA VFFGVRALRS
DPRGRYLTDN FLLHIPIIGM LLRKIAVARF TRTLGTLITS GVPILEGLNI TARTSGNRVV
EEALYKVRKS IEEGRTIVDP LRESAVFPNM VTQMIGVGEA TGAMDAMLQK IADFYEDEVD
AATKDLLTLL EPIMIVLLGI MIGGVVVSLY LPLFSMVAKL SGGG
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