| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1389 |
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| Symbol | |
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| ID | 4068924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 1685170 |
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| End bp | 1686822 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637983398 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_590465 |
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| Protein GI | 94968417 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.531963 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0257718 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGGCTG AGATCCACGA ACGTACCTGG CTTCAGTGGC TGGTCAAGGT ACGTATCATC
ATCATCACCT TCCTGCTTGG AATTGAACTC GCGATCACCA ACATCACGCC GAGTTCAGTT
TCCACCAGGC TCTTCGTCAG CGTCATCGTG CTCTGGTACA CGGTGGCCGC CTTCCTTATT
CTTCTCGCTG CCATTTGGCG CGAAACCCGC GTCCAGTCTC ATCTCCAGGT TTTCACAGAC
CTTTTCTTCG TCACCGCGGT CATCTTCGCG ACCGGTGGCG TCGACACCTC CTTTAACTTC
CTCTATCCGC TGGTCATCAT CATGGCCAGC GTGCTGCTCA CGCAGACCTG GACTTACATC
ACCGCGGTCC TCTCGGCGAT CGCTTTTACG CTCGTGCTGC AATTGGGATA CTGGGGCACC
ATCCCTTCCT ACGGCTTGCA GCACACCGAT TCGCGCAGCC TCAACATCGT CATCCTCGTC
AACTGGTTCG CGTTCATCGC GGTCGCGTAT CTTGCCGGCC GCCTCGCTGG ACGCCTTCGC
CAAATCGGCG TCGAACTCGC CGACAAGAGC GGTGAACTCC TTAACCTCCA GGCGCTGCAT
ACCAACATCA TCCAGTCCAT CAGCGCGGGG CTTATCACCA CCGGCAACGA CGGACTGATT
CACGTCGTCA ACAAAGCCGC TTCACGTTTT ACCGAGCGCG ACGAAAACGA ACTCATCGGC
ACTTCCATCA GCGACCACTT TCTCGACCCG TTGCCGATCG TCGCTTCTGC GCCGGTGCAT
GCCGAAATTC GCATGAAGAC ACCTACGGGG CGCCAGAAGA CTTTCAGCAT GATTGGTTCG
GCACTGGTGG TGCCGGAGCG CGGCGCCGTC GGCTATATCT ACACCTTCGA CGATCTGACA
GAACTGCGCC GCCTCGAACG CGAAGTGCGC CTCCGCGACC GCCTCTCTGC TGTTGGACGC
ATGGCCGCCG GCATCGCCCA CGAAATCCGC AATCCGCTGA CCTCGATCGC CGGATCGACC
AAGATGCTCG CCAGCATGTC GGACCTCAAC GAAGAGCAAC AGACACTCGC GAATATCGTG
ACGCGAGAAT CCGATCGCTT GAACTCGATC ATCACCGACT TCCTCTTCTA CGCACGTGAC
AAGAAATTCG AGCTCCGTGA GATTGACGTC ATCCCGGTGC TGAATGACAC CCTGGTACTG
TTGCAACACC GGCCCGGCAT GAACGTCGCC ATCGAGCGCC GCTTCGAAGC CGACAAAGCT
CTCTGCATGG CCGACGGCGA CAAGCTCAAA CAAGTCTTTT GGAACCTCAG CGACAACGCA
TGCCGCGCCA TGCCCGACGG AGGCACGCTC ACCGTCACGG TTCGCCCCGA CCATGAAGTC
TGGCGGGTGC ACTTCGGCGA CACTGGCCCC GGCATGACCG GACCGCAACT CGAAAAGATC
TTCGAACCCT TTCAAACTGA GTTCTACGGC GGCACCGGCC TCGGCCTCGC CATCGTCTAT
CAAATTGTGC AAGGCCACGA GGGCAAGATC TCGGTCCGCT CCGCGCCCGG ACGCGGCACC
GAATTCATGC TCCAACTGAA ACGCCCTACA AAACAATCGT TGCTGGCCGA AACCGAACCC
GTCTCCGCCG CGGCTTCAAA GGACGTCCGA TGA
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| Protein sequence | MRAEIHERTW LQWLVKVRII IITFLLGIEL AITNITPSSV STRLFVSVIV LWYTVAAFLI
LLAAIWRETR VQSHLQVFTD LFFVTAVIFA TGGVDTSFNF LYPLVIIMAS VLLTQTWTYI
TAVLSAIAFT LVLQLGYWGT IPSYGLQHTD SRSLNIVILV NWFAFIAVAY LAGRLAGRLR
QIGVELADKS GELLNLQALH TNIIQSISAG LITTGNDGLI HVVNKAASRF TERDENELIG
TSISDHFLDP LPIVASAPVH AEIRMKTPTG RQKTFSMIGS ALVVPERGAV GYIYTFDDLT
ELRRLEREVR LRDRLSAVGR MAAGIAHEIR NPLTSIAGST KMLASMSDLN EEQQTLANIV
TRESDRLNSI ITDFLFYARD KKFELREIDV IPVLNDTLVL LQHRPGMNVA IERRFEADKA
LCMADGDKLK QVFWNLSDNA CRAMPDGGTL TVTVRPDHEV WRVHFGDTGP GMTGPQLEKI
FEPFQTEFYG GTGLGLAIVY QIVQGHEGKI SVRSAPGRGT EFMLQLKRPT KQSLLAETEP
VSAAASKDVR
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