| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1384 |
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| Symbol | sdhA |
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| ID | 4068919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 1675471 |
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| End bp | 1677297 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637983393 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_590460 |
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| Protein GI | 94968412 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0637899 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGAGGATC CTCTAGTGAG CGAGTACATC ACGCATGAGC ACGATGTCCT GATCATCGGA
GCCGGGGGCG CCGGTCTGCG CGCCGCCGTT GAAGTATCAG CCGCGGGCGC AAAGGTCGCG
GTCATTTCGA AATCGCTTCT CGGCAAGGCC CACACCGTCA TGGCCGAAGG CGGCGTCGCT
GCTGCGATGG GCAACGTAGA CGACCGCGAC AGTTGGCGCG TTCACTTTGC CGACACCATG
CGCGGCGGCC AATATCTGAA CAATTGGCGC ATGGCAGAAC TGCACGCCAG GGAAGCTCCC
GAGCGCGTGC GGGAACTAGA AGCCTGGGGC GCGCTCTTCG ATCGCACCAG CGACGGTCGC
ATCCTCCAGC GAAACTTCGG AGGCCATCGC TATCCTCGGC TCGCCCATGT CGGCGACCGC
ACCGGCCTCG AGATGATCCG CACGCTTCAG GACCACGGAA TCCACCTCGG GCTTGACGTC
TTCATGGAGC ACACCGTCGT CACGCTCCTG AAGGACGGCG CACGCATTGC CGGGGCGTTT
GGATACGATC GCGAGCGCGG CCGCTTCCAC CTGTTTCGCG CTAAGGCCGT AGTGCTGGCG
ACGGGAGGAA TCGGGCGCGC CTTCAAGATC ACCAGCAATA GTTGGGAATA TACGGGCGAC
GGACATTCGC TCGCCTACCA TGCCGGTGCA TCGCTCATGG ACATGGAATT CGTCCAATTC
CATCCCACGG GAATGATCTG GCCGCCCAGC GTGCGCGGGA TTCTCGTCAC GGAAGGAGTT
CGCGGCGAGG GCGGAGTGCT GCGCAATCGC GACGGCGAAC GGTTCATGTT CAAAGACATC
CCGCCGCTCT ACGCCGCTCA AACCGCCGAC ACCCCAGAAG AAGGCTGGCG CTACACGCAA
GGCGACAAGA ATGCGCGGCG TCCACCCGAG CTGCTCACCC GTGACCACGT GGCCCGCTGT
ATCCGGCGTG AAGTTCGAGA GGGAAGAGGC AGCCCCCACG GTGGCGTGTT CCTCGACATC
GCGTGGATCA AGGAGAAGCT CCCGCACGCG CCGGAGCATA TAAAGAAGAA GCTGCCCAGC
ATGTATCACC AGTTCAAGCA GCTTGCCGAC ATCGACATTA CCCAGGAGCC CATGGAAGTC
GGTCCCACCA CGCACTACAT GATGGGTGGC GTCAAGGTGG ACGCCGATTC CCAAATGTCA
GACGTCCCCG GGCTGTATGC GGCGGGCGAA TGTGCGGCCG GCTTGCATGG CGCCAACCGG
CTGGGCGGGA ATTCGCTCTC CGATTTATTA GTGTTCGGCA AGCGCGCCGG CGAGCACGCC
GCAACCTATT CGAAGCAGAA CTCGCTGGGT GCAATCAGTC CGGAGCAACT CGCATCCACG
GAAAAATGGG CGCTCGCGGC CTTCGAACGC AAAGCCTCCG AGAACCCCTA CTCCGTGCAA
CATACCTTGC AGGACGTGAT GCAGGACCTG GTAGGAATCG TGCGCCATGA AGCGGAGATG
CAGCAAGCTC TCGAACGCAT TCGAGAGCTG AAAGCCGCCA GCCAACGTGT CGGGGTTGAC
GGTCACCGCG AATACAACGC CGGTTGGCAC ACCGCTCTCG ATTTGCAGAA CCTGTTGACC
GTGTCGGAAA TGGTCGCCCG GTCCGCGCTG GAGCGTAAAG AGAGTCGCGG CGCGCACTTC
CGCGATGATT TCCCCGAGAA GGAAAAGGAA TACGCTGGGT TCAACATCGT GGTGCGAATG
GGCGCCGGCG GAGAAATGCA ACTCACGCGC GAGCCGATCC CGCCCATGCG CGAGGAACTG
AAACAAATCA TCGAGGAGAT GAAGTAA
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| Protein sequence | MEDPLVSEYI THEHDVLIIG AGGAGLRAAV EVSAAGAKVA VISKSLLGKA HTVMAEGGVA
AAMGNVDDRD SWRVHFADTM RGGQYLNNWR MAELHAREAP ERVRELEAWG ALFDRTSDGR
ILQRNFGGHR YPRLAHVGDR TGLEMIRTLQ DHGIHLGLDV FMEHTVVTLL KDGARIAGAF
GYDRERGRFH LFRAKAVVLA TGGIGRAFKI TSNSWEYTGD GHSLAYHAGA SLMDMEFVQF
HPTGMIWPPS VRGILVTEGV RGEGGVLRNR DGERFMFKDI PPLYAAQTAD TPEEGWRYTQ
GDKNARRPPE LLTRDHVARC IRREVREGRG SPHGGVFLDI AWIKEKLPHA PEHIKKKLPS
MYHQFKQLAD IDITQEPMEV GPTTHYMMGG VKVDADSQMS DVPGLYAAGE CAAGLHGANR
LGGNSLSDLL VFGKRAGEHA ATYSKQNSLG AISPEQLAST EKWALAAFER KASENPYSVQ
HTLQDVMQDL VGIVRHEAEM QQALERIREL KAASQRVGVD GHREYNAGWH TALDLQNLLT
VSEMVARSAL ERKESRGAHF RDDFPEKEKE YAGFNIVVRM GAGGEMQLTR EPIPPMREEL
KQIIEEMK
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