Gene Acid345_1365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1365 
Symbol 
ID4068841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp1656504 
End bp1657334 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content61% 
IMG OID637983374 
Productdiguanylate cyclase 
Protein accessionYP_590441 
Protein GI94968393 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.134313 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGC CCACGCCACA ACTCGATGCC TCGCAGCATT CCAAGGGGAT GCTCGCGAGC 
CTCAGCCAGC AACTCGCTTC CATCGAGAAA CGTGACACGG AATTATGGCT GATCCTGCTT
TCGATTGGAG CCATGGTAGG CGGATGCCTG CTCCTGGTGC TGGCGCCGGC GGCATTCCTG
CGTGGCGGAC AATTTCACTT CGAGGTCTCC ATCAGCAAGG AGAGCTTCTT CGGCCTGATC
GCGCTCTTGA CCATTGCCAA CGGCTATATC GTTACGCGAC GCTTCCAGTA CCGCAAGGTG
CGCCAGCAAC TGATCTCGTC CACCATTCAG AACGAACTGG TGCGGCTACA GTCCTTCACC
GATCCGCTGA CCGAGGTCTA TAACCGCCGC TCGCTCGACG ACATGGCCGG CCGCTATATC
AGCAGCGCGC GCCGCCGCAA GACCGACCTC ACCTTCATGC TCATTGATGT GGACAAGTTC
CGCCAAGTGA ACAGCAAGTT CGGCCACCTT ACCGGCGACG TGGTGCTCGC CGAAGTCGCG
GCCCTGCTGC GGACTTCCGT GCGCGGCTCC GATGCGGTGG TGCGCTACGG GGGCGATGAG
TTCCTCATCA TCCTTCCGGA GTCCACCGCC GAGCACGCCA CCCACGTCGT GGACCGCATA
AATCGCAACC TCACCGACTG GAACCACAGC GGCCAGCTCA AGGACTTCGA ACTGTCGCTC
AGCATCGGCG TAGCGCAATG GAAGGACGGC GCCACCCTCG ACGAAACCCT GGATGCCGCC
GACCACAAAA TGTACGCGAT GAAGGGCGCC CAAACCGCCC ACTCAAAATA A
 
Protein sequence
MNLPTPQLDA SQHSKGMLAS LSQQLASIEK RDTELWLILL SIGAMVGGCL LLVLAPAAFL 
RGGQFHFEVS ISKESFFGLI ALLTIANGYI VTRRFQYRKV RQQLISSTIQ NELVRLQSFT
DPLTEVYNRR SLDDMAGRYI SSARRRKTDL TFMLIDVDKF RQVNSKFGHL TGDVVLAEVA
ALLRTSVRGS DAVVRYGGDE FLIILPESTA EHATHVVDRI NRNLTDWNHS GQLKDFELSL
SIGVAQWKDG ATLDETLDAA DHKMYAMKGA QTAHSK