Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1365 |
Symbol | |
ID | 4068841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 1656504 |
End bp | 1657334 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637983374 |
Product | diguanylate cyclase |
Protein accession | YP_590441 |
Protein GI | 94968393 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.134313 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCTGC CCACGCCACA ACTCGATGCC TCGCAGCATT CCAAGGGGAT GCTCGCGAGC CTCAGCCAGC AACTCGCTTC CATCGAGAAA CGTGACACGG AATTATGGCT GATCCTGCTT TCGATTGGAG CCATGGTAGG CGGATGCCTG CTCCTGGTGC TGGCGCCGGC GGCATTCCTG CGTGGCGGAC AATTTCACTT CGAGGTCTCC ATCAGCAAGG AGAGCTTCTT CGGCCTGATC GCGCTCTTGA CCATTGCCAA CGGCTATATC GTTACGCGAC GCTTCCAGTA CCGCAAGGTG CGCCAGCAAC TGATCTCGTC CACCATTCAG AACGAACTGG TGCGGCTACA GTCCTTCACC GATCCGCTGA CCGAGGTCTA TAACCGCCGC TCGCTCGACG ACATGGCCGG CCGCTATATC AGCAGCGCGC GCCGCCGCAA GACCGACCTC ACCTTCATGC TCATTGATGT GGACAAGTTC CGCCAAGTGA ACAGCAAGTT CGGCCACCTT ACCGGCGACG TGGTGCTCGC CGAAGTCGCG GCCCTGCTGC GGACTTCCGT GCGCGGCTCC GATGCGGTGG TGCGCTACGG GGGCGATGAG TTCCTCATCA TCCTTCCGGA GTCCACCGCC GAGCACGCCA CCCACGTCGT GGACCGCATA AATCGCAACC TCACCGACTG GAACCACAGC GGCCAGCTCA AGGACTTCGA ACTGTCGCTC AGCATCGGCG TAGCGCAATG GAAGGACGGC GCCACCCTCG ACGAAACCCT GGATGCCGCC GACCACAAAA TGTACGCGAT GAAGGGCGCC CAAACCGCCC ACTCAAAATA A
|
Protein sequence | MNLPTPQLDA SQHSKGMLAS LSQQLASIEK RDTELWLILL SIGAMVGGCL LLVLAPAAFL RGGQFHFEVS ISKESFFGLI ALLTIANGYI VTRRFQYRKV RQQLISSTIQ NELVRLQSFT DPLTEVYNRR SLDDMAGRYI SSARRRKTDL TFMLIDVDKF RQVNSKFGHL TGDVVLAEVA ALLRTSVRGS DAVVRYGGDE FLIILPESTA EHATHVVDRI NRNLTDWNHS GQLKDFELSL SIGVAQWKDG ATLDETLDAA DHKMYAMKGA QTAHSK
|
| |