Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1335 |
Symbol | |
ID | 4070624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 1612383 |
End bp | 1614515 |
Gene Length | 2133 bp |
Protein Length | 710 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637983344 |
Product | serine phosphatase |
Protein accession | YP_590411 |
Protein GI | 94968363 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.96809 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAGAT CACTACTTCG CGACCTCCAA GATCGGCTGA TACTCAAAGG CTGGTATCCG CAGACCAAGC TCGCCCGCTG GACGACCTAC CTCGTCCTGA TTGATCTCGC CCTCTGGCTC ATTCGCCGCG CGACGAAATT CTTCAAGCCC CAGTCCGACT TCGCGGGCGG CTGGCTTACT TTCTTCACCT TAATCGTAGG CTGCTTCGCG CTTGCCTGGG TCCTGCGCTG GACCAAGCAG CACCTGCTCT GGCGCCTGCG CAACCGCCTG CTGGTAACTT ACGTTTTTAT CGGTGCCGCT CCCGTCATTC TCATCGGCCT GATGCTCTTC CTTGCCGGCT GGCTCTTCGT CGGCCAATTC GCAGCCGACC TCGCCAGCAA GGACCTCAAC ATCGAACTAC GCCGTCTCAC CGCGGCGAAC CACACCCTCA TGGGCGGGGC CAAGACGTTG GTCCGCACCG GCCGCATCGA ACAGGACTAT AAGGACATCG TTGACCGCGA TATCGCATCG CGAGAGTTTC CCAGCCGTCA GGTCTCCCTC TGGTATCGCG GCAAGGGATA CCTTCTGCAA GGCAGTGCCA CCGACCAACC CATCGCCGTC CCCGACCACG CGAAGAATGG CTTCGCCGCG ATAACGCTCG CCGATAACAT GATCTTCCTG CGCAGCGTTT CGCGGAGCAA GATCGGCAAT GACGAACTTA CTCTGGTCAG CAGTGTCCCG CTCAATCGCG AAATGCTTGC GAACGTCGCG CAGAACCTTG GATTCCTGAC CGTGGGTCCT GTCCCGGTAG GAGCAAACGG CGCGCCCACC CAAGGCTCAA CCGTCTCCTA CAATCAGGAC GGCAAAGAAC AGACCAATTT CTCTTTCGTT GAACCGGAAC GCGGGCTCGA TGCGCTGGTC CAGGCCGGCG ACGTCCCGAC TCCCGCTGCC TGGTACGACT GGAAGCTCAC CTGGGGCACG TTCCTCAGCA TGACCGATTG GACCGACGGC AAAAGGCGCG ACGGCTACAT CTCGGTGCAA ACCCGCCTCT TCCAGCTCTA TAGTCGGCTC TTCGAAGCCA TCGGGAAGAA CGCTTCCATC TTCCTCACCG CGCTTAGCGT CATCGCCGTT TTCCTCCTCG TCATCGAGCT GATCGCCTTA TTTATCGGCC TGCGACTTAC CCGCACCATC ACCCGCAGCG TCGCCGAGCT CTACAACGCC ACTGAGCACA TCAACAAAGG CGACTTCCAC CACCGCATCC AGGTGCGCTC GAAGGACCAG CTCGCCGCCC TCGAGGGCGC GTTCAACTCC ATGACCACCT CCATCGAGGC GCTTATCCTG GAGCAGAAAG AAAAGCAGAA GCTCGAAAGC GAGCTCGCCA TCGCGCAGGA AGTCCAGGCC CTGCTCTTCC CCCGCGAGGT CAGTCAATCC GAGTCGCTCG AAATGCACGG CGTCTGCCGC CCGGCCCGCA CCGTGAGTGG CGATTACTAC GACTTCCTCC AACTCGGCCA CAACCAGATC GGCCTTGCCG TCGGCGACAT CAGCGGCAAA GGAATTTCCG CCGCGCTCCT CATGGCCACG GTGCACGCCT TCGTCCGCGC CTACACGATT GAAGAAGCGC TGGCGGAAGC CAAGGTGGGC GCCGCGGTCG GAACGCAGCA ACTTGTGTTC ACCGCTTCTG GCGATCACCT GCCGCCGGCG ACGCTGCTCG CGCTGCTCAA CGAACAGCTG TTCCGCTCCA CGCCCGCGTC CAAGTACGCG ACCATGTTCC TTGGTTTTTA CGACGGCCAT CGCAAGCGCC TCACCTACTC CAACGCCGGA CACCTGCCCC CGTTCCTCGT CTGCGCCGAC GGCTCCTATC GCAAGCTGGG TGATGGCGGC ATGGTTGTCG GTCTCTTCGG CGGCGTAAGC TATGAAAACG AGCACGTCGA GCTCAGTTCC GGCGACATCA TCGTGGCTTA CTCCGACGGC GTCACCGAAC CCGAAAATGA GTTCGGCGAA TTCGGCGAAG AACGTCTCGC CCAAATCGTC CGCGAACACT CCAGCCTCCC GTTGCCCCGT ATCGCCGACG CCGTAATCAC CGCCGTCACC GACTGGATCG GCGGCGCCGA ACAACCCGAC GACATCACCG TCGTCCTCGC CCGCGCCCGC TAA
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Protein sequence | MKRSLLRDLQ DRLILKGWYP QTKLARWTTY LVLIDLALWL IRRATKFFKP QSDFAGGWLT FFTLIVGCFA LAWVLRWTKQ HLLWRLRNRL LVTYVFIGAA PVILIGLMLF LAGWLFVGQF AADLASKDLN IELRRLTAAN HTLMGGAKTL VRTGRIEQDY KDIVDRDIAS REFPSRQVSL WYRGKGYLLQ GSATDQPIAV PDHAKNGFAA ITLADNMIFL RSVSRSKIGN DELTLVSSVP LNREMLANVA QNLGFLTVGP VPVGANGAPT QGSTVSYNQD GKEQTNFSFV EPERGLDALV QAGDVPTPAA WYDWKLTWGT FLSMTDWTDG KRRDGYISVQ TRLFQLYSRL FEAIGKNASI FLTALSVIAV FLLVIELIAL FIGLRLTRTI TRSVAELYNA TEHINKGDFH HRIQVRSKDQ LAALEGAFNS MTTSIEALIL EQKEKQKLES ELAIAQEVQA LLFPREVSQS ESLEMHGVCR PARTVSGDYY DFLQLGHNQI GLAVGDISGK GISAALLMAT VHAFVRAYTI EEALAEAKVG AAVGTQQLVF TASGDHLPPA TLLALLNEQL FRSTPASKYA TMFLGFYDGH RKRLTYSNAG HLPPFLVCAD GSYRKLGDGG MVVGLFGGVS YENEHVELSS GDIIVAYSDG VTEPENEFGE FGEERLAQIV REHSSLPLPR IADAVITAVT DWIGGAEQPD DITVVLARAR
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