| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1326 |
|---|
| Symbol | |
|---|
| ID | 4070615 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 1600656 |
|---|
| End bp | 1601642 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637983335 |
|---|
| Product | endonuclease IV |
|---|
| Protein accession | YP_590402 |
|---|
| Protein GI | 94968354 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0648] Endonuclease IV |
|---|
| TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCGCG CGGTTTCGAA AAAAGTAGAA ATAGACATCC TCAAACTCAT CCCACCGCCA
AAAACTCCGC CCAAACGCAC TGCGGTTCGC ATCGGTATTC ACACTTCGAG TGCCGGTGGA
GTCGAACTCG CCGCGGAACG CGCCTACCGT CTCGGCTGCT CCTGCCTCCA AATCTTCTCT
TCCAGTCCAC GCCAATGGAA GCCCTTTGAA CTCGGCCGCT CGCAGTGCGA GACGATGTCG
TCCATTCGCG CCAAGTATGA CCTCAACCCG CTCGTCATCC ACGCGAATTA CTTGATCAAT
GTCGCCGGCG GCAATCCCGA GTTCCACCAG AAATCCATCG AAGCCTTCCG CGCCGAGGTC
CAGCGCGGCA TCGATCTCTG CGCCGACTAC CTCGTTCTGC ATCCCGGCTC ATTCAAAGGC
GCGACGCGCG AAGACGGCCT GCAACGCGCC GCGGAAGCCA TCGAAGCCGC AGTCGACGGT
CTCGGCATCG AGAAGACGAA CCTGAAGATC ACCATCGAGA ACACCGCCGG TTCCGAATTC
TCGTTAGGCG GTAGCTTCGA ACAAGTTGCG GAATTAATGG CGCGCCTGCG CAAGCACGTC
CCCGTCGCCG CCTGCATCGA CACCTGCCAT ACCCACGTCG CCGGCTACGA CATCACCACG
AAAAAGGGCT TCGAGAAAAC CCTGCAGCAA CTCGACGACA CCGTCGGCCT GAAGAATGTC
GGAGTTTTCC ACTGTAACGA CGCCAAAGCC CCCCGCGGCT CCAAGCTCGA CCGCCACCAG
CACATCGGCC AGGGAACCAT CGGCCTCGAA CCCTTCAAAT GGCTGTTGAA CGATCCACGG
CTACAGCACC CCGCGTTCAT CGCCGAAACG CCTATTGACG AGCCGCTGGA TGACCTGAAG
AATATCGACG CCCTGAAAAG CTGTGTGAAG AAATCAAAGC CTGCCATTCA CCACAGAGAC
GCAGAGGCAC AGAGAACAAA GAAATAA
|
|---|
| Protein sequence | MPRAVSKKVE IDILKLIPPP KTPPKRTAVR IGIHTSSAGG VELAAERAYR LGCSCLQIFS
SSPRQWKPFE LGRSQCETMS SIRAKYDLNP LVIHANYLIN VAGGNPEFHQ KSIEAFRAEV
QRGIDLCADY LVLHPGSFKG ATREDGLQRA AEAIEAAVDG LGIEKTNLKI TIENTAGSEF
SLGGSFEQVA ELMARLRKHV PVAACIDTCH THVAGYDITT KKGFEKTLQQ LDDTVGLKNV
GVFHCNDAKA PRGSKLDRHQ HIGQGTIGLE PFKWLLNDPR LQHPAFIAET PIDEPLDDLK
NIDALKSCVK KSKPAIHHRD AEAQRTKK
|
|---|
| |