Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1302 |
Symbol | |
ID | 4069494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 1579650 |
End bp | 1580498 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637983311 |
Product | hypothetical protein |
Protein accession | YP_590378 |
Protein GI | 94968330 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00400766 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGAGACT TTCGCATTTC TGCGCACCAG TCTGCTTCCA TGTTGCCGTC TGCCGTGTAT TGGCGAATCG TCGCGCTATG CGTGGCCTTG TTCGTCCTGA TCGCGTGTAC CTGCGAGGGG CTCGCTCAAT CGACGCCTCC GCCAAGCGGT TCGAAGGCAC CCGTCAAAAA CATTGTGCTT GTCCATGGTG CTTGGGCCGA CGGCTCAGGG TGGAAGGGCG TGTACGACAT CCTCGTTAAA GACGGCTACC ACGTAAGCAT CGTGCAGGAG CCAGAAACAT CGTTTCAAGA TGACGTTGCC ACGACGAAGC GCGTGCTCGC GTTGCAGGAT GGCCCGTGCA TTCTCGTCGC GCACAGCTAC GGCGGAGCCG TGATCACCGA AGCCGGCAAT GATCCGGCGG TTGCGGGGCT CGTGTATATC GCCGCGCACA TGCCAGACGC AAGCGAGAAC GAGGCCGACG ATGGCAAGCG CTTCCCCAGC GATCTGAGCA AGTCCAACGC GATCAAGAAG ACCGCCGATG GCTTTACCTA CCTCGATCCC GCGCAACTGC ACGAGTACTT CGCGGCCGAC TTGTCAGCCG AGCAAGCAGC ATTCCTCGCG AGTTCCCAGG TCTGGAACAA GGCCGAGAAC TTCCGCGCGG TGATTTCCCA AGCGGCCTGG CGAACCAAGC CAAGCTGGGC GCTGGTTGCG GCGAGCGACC GCACAATCAA TCCCAACCTC GAGCGTTGGT ACGCGGAACG CGCCCACAGT CACAAAATCG AAGTTGCGGG AGCGAGCCAC GTTGTGTACA TCTCTCATCC GAAAGAAGTG GCTGCGCTGA TTGAACAGGC GGCCTCGTCA ACCAAGTGA
|
Protein sequence | MRDFRISAHQ SASMLPSAVY WRIVALCVAL FVLIACTCEG LAQSTPPPSG SKAPVKNIVL VHGAWADGSG WKGVYDILVK DGYHVSIVQE PETSFQDDVA TTKRVLALQD GPCILVAHSY GGAVITEAGN DPAVAGLVYI AAHMPDASEN EADDGKRFPS DLSKSNAIKK TADGFTYLDP AQLHEYFAAD LSAEQAAFLA SSQVWNKAEN FRAVISQAAW RTKPSWALVA ASDRTINPNL ERWYAERAHS HKIEVAGASH VVYISHPKEV AALIEQAASS TK
|
| |