Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1286 |
Symbol | |
ID | 4071358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 1563592 |
End bp | 1565118 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637983295 |
Product | lysyl-tRNA synthetase |
Protein accession | YP_590362 |
Protein GI | 94968314 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.342382 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGTTAG AAGACAATAT TTACCAGCTT CGCCTCGAGA AGCTGAAGCA GATCGAAGCC CTCGGCCAGC GCGCCTACCC GTTCAAATAC GAGACGACCC ACACCGTCCC CGAGATCTGG GAGCAGTTCG AGTCCAAGAC TGGCGAAGAA CTCGAGGCCC ATCACATCGA CGTCCGCGTC GCCGGCCGCC TCATGTCCAT CCGCGGCCAG GGCAAGGCCG GCTTCGCCCA CCTCCAGCAG AACGGCAAGA AGCTCCAGCT CTACGTGCGG CTCGACAACG TCGGCGAAAA AGGCTTCGCC CTTTATAAGC TGCTCGATCT CGGCGACTTC ATCGGCGCCA AGGGATACCT CTTCCGCACC CGCACCGGCG AACTCAGCAT CCACGTCGAA GAAATCACCT TCTTAGCCAA GGACCTTCTC CCGCTGCCCG AAAAATGGCA CGGCCTCACC GACGTCGAAC TGCGCTACCG CCGCCGTTAC GTGGACATGA ACATGGACCC CGACGTCCGC GAGGTCTTCA TCAAGCGTGC CCGCATCCTC CAGACGATGC GCAGCTTTTT CGACCAGCGC GGTTTCGTCG AAGTCGAGAC CCCGATGCTC CAAAGCCAGT ACGGAGGCGC TGCTGCACGT CCGTTCACCA CCCACCACAA CACGCTCGAC ATGGATCTCT ACCTGCGCAT CGCGCCCGAG CTCTATCTCA AGCGGCTCGT CGTGGGCGGC ATCGACCGCG TCTACGAGAT CAACCGCAAC TTCCGTAACG AAGGCATCAG TACCCGGCAC AACCCCGAGT TCACCATGCT CGAGTTCTAC TGGGCCTACG CCGATTACTT CGACCTCATG ACCTTGACGG AAGAGCTCTT CCGCCAGCTC GCCACCGAAG TCACGGGCGG GACCACGGTC CAGTACGGCG ACCACACCCT CGACTTCAGC AAGATGGAAC GTCTCACCAT GCGCGACGCC ATCCTGAAGT ACTGGCCCGA GAACGCCGGC CCCAAGCCCG CGTTCGAAGA CTTCTCCAGC GCCGAAAAGG TCGCCGCGAT GGGCAAGCAC CTCAGCGAAC TGAAGCTCAT GCCCTTCCAG GTGAATGCGC CGAAGGGCGT AACCATCGCC GCAATGTTCG AGGCCCTCTC CGAGGAGCAC CTCGTGCAGC CGACAATCCT TTACGACTTC CCGGTCGAGA TCTCGCCGCT CAGCAAGAAC CACCGCGAAG ATCCGGAGTG GGTGGAGCGC TTCGAAGTCT TCTGCGCCGG CATGGAAATC GGCAACGCCT TCAGCGAACT CAACGATCCC ATCGAGCAGC GTAAGCGCTT CGAAATGCAG TTAGCCGAAC GCGCCCGCGG CGACGAAGAA GCCCATCAGA TGGACGAAGA CTACGTCCGC GCCCTGAGCT ACGGCATGCC GCCGACGGGA GGCATGGGCA TCGGCATCGA CCGTACGGTG ATGCTCCTGA CCAACAGCAA ATCGATCCGC GACGTAATCC TCTTCCCGCT GCTGCGACCG GAGCAGGAGG AACCTGCTGA GCCATGA
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Protein sequence | MSLEDNIYQL RLEKLKQIEA LGQRAYPFKY ETTHTVPEIW EQFESKTGEE LEAHHIDVRV AGRLMSIRGQ GKAGFAHLQQ NGKKLQLYVR LDNVGEKGFA LYKLLDLGDF IGAKGYLFRT RTGELSIHVE EITFLAKDLL PLPEKWHGLT DVELRYRRRY VDMNMDPDVR EVFIKRARIL QTMRSFFDQR GFVEVETPML QSQYGGAAAR PFTTHHNTLD MDLYLRIAPE LYLKRLVVGG IDRVYEINRN FRNEGISTRH NPEFTMLEFY WAYADYFDLM TLTEELFRQL ATEVTGGTTV QYGDHTLDFS KMERLTMRDA ILKYWPENAG PKPAFEDFSS AEKVAAMGKH LSELKLMPFQ VNAPKGVTIA AMFEALSEEH LVQPTILYDF PVEISPLSKN HREDPEWVER FEVFCAGMEI GNAFSELNDP IEQRKRFEMQ LAERARGDEE AHQMDEDYVR ALSYGMPPTG GMGIGIDRTV MLLTNSKSIR DVILFPLLRP EQEEPAEP
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