Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1282 |
Symbol | |
ID | 4071354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 1557586 |
End bp | 1559019 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637983291 |
Product | pyridoxal-dependent decarboxylase |
Protein accession | YP_590358 |
Protein GI | 94968310 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCTTCG AACTTACACG CGACGAACGA CAGCGACTCG GCTATCAACT CATCGACCGC ATCAACGACT TTTTCGAGTC GCTGCCCACG CGCAACGTCC AACTCCCAGC CAACGAACGC ACCTTCAGCC CGCTCGCCGA GCCCATGCCC GAGCTCGGCG ACGACGCCAC CCGCGTTCTC GACGACCTCA CCACCGAGCT CATTGACCGC GGCTTCCACG TTCCCGCCGC TAACTACTTC GGCCTGATGA ATCCCACGCC GACATACATG GCGGTTCTCG CGGAAGCTCT CGTCTCCGCG CTCAATCCGC AACTCGCATC CCTCGCACGT TCCCAACTGG CCAGCAAGAT TGAAAATGAA ACCGTCCGCT GGATCGGCGA ACGCGTCGGC TGGAACTCCG CCTTCGACGG CACCTTCACC AGCGGCGGCA ACGAAGCCAA CTTCTCCGGC CTCGCCCTCG CCCTGGCCCA CCACTTCCCC GACGCTATCG AAAACGGCGT CGCCTCCATC GGCGCGCAGC CCGTCGTCTA CTGCTCTGCG GAAGCCCATC ACTCGCTCGA CAAATCGGTC GGTCTCCTCG GTCTCGGACG CAAGGCACTC CGCCGCATTC CGATCAACGA TCGCATCCAG CTTGATCCTG AAAAATTAGT TAAGGAAATC GATAACGATC GATCTGCGGG ATACAAGCCT TTCTGCGTAG TCGCCACCGC CGGTACCACC AACTCCGGCG CCGTGGACGA CATCTCTGCC CTGGCCGACA TCTGCGAGAA GCACAATCTC TGGCTCCATC TCGATGGTGC CTACGGTGCT GCTGCCATCT TCAGCGACAA GCATCGCGAC TTGGTCCGCG GCATCGAGCG CACCGACTCC GTGACCATCG ATCCGCACAA GTGGCTCGCC ATGCCCTTCG CCGCCGGTGT CATCCTCACC CGCCATCCTC AGGCCTTGCG CGATGCCTTC GAGGTCTCGA CGCCCTATAT GCCCAAGCTT GCCAACGCCG CCATGACCGA CAACTTCAAG GTCAGCACGC AGTGGTCGCG CCGCATGAAC TCGCTCAAGG TCTACCTCAC GCTCAAAGTT CACGGCCGCG CCGCCTACGA AGAGCTCATC GACCGTCAAC TTCAGCTCGC GAAAGTCGCA GCCGACTGGT TCGAACAATC CGATCTCTTC GAACTCGCCG TGCCGCAGGT ATTACCGATC CTCAATTTCC GCCTGAAGGG CGTGCCCGAG CAAGATCTCG CCGCAGCCCA CACGCGCATC GTCGAAGAAG TCACCCGCGA CGGCCAGCGC TGGATCTCGC CCACGATGGT GAATGGTCGC AGCGTCTTGC GCATGATGAT CATCAGCTAC TTAACGACGG AAGAACATAT TCGCGATCTG CAGCAAGCGC TCGTTAGTGC GGCACGCACT CTGCCGGCAA CTGCAAGGAG TTAG
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Protein sequence | MGFELTRDER QRLGYQLIDR INDFFESLPT RNVQLPANER TFSPLAEPMP ELGDDATRVL DDLTTELIDR GFHVPAANYF GLMNPTPTYM AVLAEALVSA LNPQLASLAR SQLASKIENE TVRWIGERVG WNSAFDGTFT SGGNEANFSG LALALAHHFP DAIENGVASI GAQPVVYCSA EAHHSLDKSV GLLGLGRKAL RRIPINDRIQ LDPEKLVKEI DNDRSAGYKP FCVVATAGTT NSGAVDDISA LADICEKHNL WLHLDGAYGA AAIFSDKHRD LVRGIERTDS VTIDPHKWLA MPFAAGVILT RHPQALRDAF EVSTPYMPKL ANAAMTDNFK VSTQWSRRMN SLKVYLTLKV HGRAAYEELI DRQLQLAKVA ADWFEQSDLF ELAVPQVLPI LNFRLKGVPE QDLAAAHTRI VEEVTRDGQR WISPTMVNGR SVLRMMIISY LTTEEHIRDL QQALVSAART LPATARS
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