Gene Acid345_1282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1282 
Symbol 
ID4071354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp1557586 
End bp1559019 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content61% 
IMG OID637983291 
Productpyridoxal-dependent decarboxylase 
Protein accessionYP_590358 
Protein GI94968310 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0076] Glutamate decarboxylase and related PLP-dependent proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTTCG AACTTACACG CGACGAACGA CAGCGACTCG GCTATCAACT CATCGACCGC 
ATCAACGACT TTTTCGAGTC GCTGCCCACG CGCAACGTCC AACTCCCAGC CAACGAACGC
ACCTTCAGCC CGCTCGCCGA GCCCATGCCC GAGCTCGGCG ACGACGCCAC CCGCGTTCTC
GACGACCTCA CCACCGAGCT CATTGACCGC GGCTTCCACG TTCCCGCCGC TAACTACTTC
GGCCTGATGA ATCCCACGCC GACATACATG GCGGTTCTCG CGGAAGCTCT CGTCTCCGCG
CTCAATCCGC AACTCGCATC CCTCGCACGT TCCCAACTGG CCAGCAAGAT TGAAAATGAA
ACCGTCCGCT GGATCGGCGA ACGCGTCGGC TGGAACTCCG CCTTCGACGG CACCTTCACC
AGCGGCGGCA ACGAAGCCAA CTTCTCCGGC CTCGCCCTCG CCCTGGCCCA CCACTTCCCC
GACGCTATCG AAAACGGCGT CGCCTCCATC GGCGCGCAGC CCGTCGTCTA CTGCTCTGCG
GAAGCCCATC ACTCGCTCGA CAAATCGGTC GGTCTCCTCG GTCTCGGACG CAAGGCACTC
CGCCGCATTC CGATCAACGA TCGCATCCAG CTTGATCCTG AAAAATTAGT TAAGGAAATC
GATAACGATC GATCTGCGGG ATACAAGCCT TTCTGCGTAG TCGCCACCGC CGGTACCACC
AACTCCGGCG CCGTGGACGA CATCTCTGCC CTGGCCGACA TCTGCGAGAA GCACAATCTC
TGGCTCCATC TCGATGGTGC CTACGGTGCT GCTGCCATCT TCAGCGACAA GCATCGCGAC
TTGGTCCGCG GCATCGAGCG CACCGACTCC GTGACCATCG ATCCGCACAA GTGGCTCGCC
ATGCCCTTCG CCGCCGGTGT CATCCTCACC CGCCATCCTC AGGCCTTGCG CGATGCCTTC
GAGGTCTCGA CGCCCTATAT GCCCAAGCTT GCCAACGCCG CCATGACCGA CAACTTCAAG
GTCAGCACGC AGTGGTCGCG CCGCATGAAC TCGCTCAAGG TCTACCTCAC GCTCAAAGTT
CACGGCCGCG CCGCCTACGA AGAGCTCATC GACCGTCAAC TTCAGCTCGC GAAAGTCGCA
GCCGACTGGT TCGAACAATC CGATCTCTTC GAACTCGCCG TGCCGCAGGT ATTACCGATC
CTCAATTTCC GCCTGAAGGG CGTGCCCGAG CAAGATCTCG CCGCAGCCCA CACGCGCATC
GTCGAAGAAG TCACCCGCGA CGGCCAGCGC TGGATCTCGC CCACGATGGT GAATGGTCGC
AGCGTCTTGC GCATGATGAT CATCAGCTAC TTAACGACGG AAGAACATAT TCGCGATCTG
CAGCAAGCGC TCGTTAGTGC GGCACGCACT CTGCCGGCAA CTGCAAGGAG TTAG
 
Protein sequence
MGFELTRDER QRLGYQLIDR INDFFESLPT RNVQLPANER TFSPLAEPMP ELGDDATRVL 
DDLTTELIDR GFHVPAANYF GLMNPTPTYM AVLAEALVSA LNPQLASLAR SQLASKIENE
TVRWIGERVG WNSAFDGTFT SGGNEANFSG LALALAHHFP DAIENGVASI GAQPVVYCSA
EAHHSLDKSV GLLGLGRKAL RRIPINDRIQ LDPEKLVKEI DNDRSAGYKP FCVVATAGTT
NSGAVDDISA LADICEKHNL WLHLDGAYGA AAIFSDKHRD LVRGIERTDS VTIDPHKWLA
MPFAAGVILT RHPQALRDAF EVSTPYMPKL ANAAMTDNFK VSTQWSRRMN SLKVYLTLKV
HGRAAYEELI DRQLQLAKVA ADWFEQSDLF ELAVPQVLPI LNFRLKGVPE QDLAAAHTRI
VEEVTRDGQR WISPTMVNGR SVLRMMIISY LTTEEHIRDL QQALVSAART LPATARS