Gene Acid345_1270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1270 
Symbol 
ID4073240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp1542522 
End bp1544189 
Gene Length1668 bp 
Protein Length555 aa 
Translation table11 
GC content57% 
IMG OID637983279 
ProductFAD dependent oxidoreductase 
Protein accessionYP_590346 
Protein GI94968298 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGATGCA GCGGGGATTG TGGCGATTGC GTTTGCTACA ATACCGGCGT CTCGTTCCGC 
TCCATTAAAA TGACCAATCA AACAACGAAT AACAAATTCG ACGCTATCGT TATAGGCGGC
GGCCACAATG GGCTGGTGAA CGCCGCCTAT CTTGCCCGCG CCGGCAAGAA GACGGTCGTT
CTGGAGCGCA GGCACGTTGT CGGTGGCGCC GCTGTTACAG AAGAGATCTT TCCCGGTTTC
AAGTTCTCCG TGTGTTCCTA CGTCGTCTCT CTTCTGCGAC CGGAAATCAT CCGCGACCTC
GATCTCCCGC GTCACGGTCT CGAAATCCTT CCCCTGGATG GGACGTTTAC TCCGATGCCC
AGTGGCGACT ACCTGTGGCG CGTAAACGAT CACGGCAAGA CACGCCGTGA GATCGCCCGC
CATTCGAGAG TAGACGCAGA GGCGTACGAG GAATTCGGGA AGGCCATGCT GCAGATGTGC
AAGTTCGTTA AGCCCATCCT GTCGATGACG CCCCCGAATC CTACAACGCT TAAGCCGAGT
GAGTTGATGA AGCTGCTCTT CCTCGGCCGG CGCTTTAAGG ACTTGCCCGA GGACGACAAG
TACAACCAGG TCCAGCTCAT GACGATGAGC GCGATCGACT TTCTCGATCA ATGGTTCGAG
ACGGACGTGC TCAAGGCCAC GATGTCAGCA TCCGGCATCA TCGGCACATT TCTCGGCGTA
CGTTCCCCGG GTACGGCTTA CGTTTTGCTT CACCACTACA TGGGCGAGAT TGACGGCGCC
TTCCGGTCGT GGGGATTCGC CCGCGGCGGC ACCGGAGCCA TCTCAAATGC AATTGCCGAT
GCTGCGCGCG AAGCGGGCGC GGAGATTCGC ACCAAAGCAG GGATTGCGAA GATCCTGGTT
AAGAGCGGCA AAGCGATCGG CGTTGTCCTG GAAAACGGGG ACGAGATTTT CGGCAACGTG
ATTTCCTCGA GCGTCGACCC GAAACTTACG TTCCTCAAGA TGCTCGACCG GAACCAGCTT
CCGGACGAAT TCGTTTCGAG CGTGGAGCAC TACAAGTTCC GCGGCTCCTC TGCGAAGGTG
AACCTCGCGC TCGATAGTCT TCCGGATTTC ACATGCCTGC CGGGACGCGG CGAACATCTG
CGCGGTGCAA TTTCGATTTC GCCCAGCGTC GATTACATGG AGCGGGCCTA CGACGACGCT
AAGTACGGTG AGTATTCCAA GCGCCCGTAC ATCGATATGG TGATTCCGAG TCTGACCGAT
CCTTCGGTTG CGCCTCCCGG AAAGCACGTT ATGTCGTGTT TCGTGCAGTA TGCGCCGTAC
CATCTCGCCA GTGGCAATTG GGACGAGAAA AAAGAGGCAT TCGGCGACAC CGTAATCGAC
ACGCTGAGCC AGTATGCGCC GAACATCAAG AACATCATCG TCGGTAGACA GGTGGTGACA
CCACTCGACC TGGAGCGGGA GTGGGGCTTG ACCGAAGGAA ACATCTTCCA GGGCGAGCTT
TCCCTGGAGC AGTTGTTCTT CCTCCGGCCA GTTCCCGGAT GGGCGCAATA TCGAACTCCG
ATCAAGAACC TTTATATGTG CGGAAGCGCG ACCCATCCGG GCGGCGGGAT TATGGGGGCT
CCCGGCCGGA TCGCCGCACT GGAAATCCTG AAAGACTGGA AAGCCTGA
 
Protein sequence
MRCSGDCGDC VCYNTGVSFR SIKMTNQTTN NKFDAIVIGG GHNGLVNAAY LARAGKKTVV 
LERRHVVGGA AVTEEIFPGF KFSVCSYVVS LLRPEIIRDL DLPRHGLEIL PLDGTFTPMP
SGDYLWRVND HGKTRREIAR HSRVDAEAYE EFGKAMLQMC KFVKPILSMT PPNPTTLKPS
ELMKLLFLGR RFKDLPEDDK YNQVQLMTMS AIDFLDQWFE TDVLKATMSA SGIIGTFLGV
RSPGTAYVLL HHYMGEIDGA FRSWGFARGG TGAISNAIAD AAREAGAEIR TKAGIAKILV
KSGKAIGVVL ENGDEIFGNV ISSSVDPKLT FLKMLDRNQL PDEFVSSVEH YKFRGSSAKV
NLALDSLPDF TCLPGRGEHL RGAISISPSV DYMERAYDDA KYGEYSKRPY IDMVIPSLTD
PSVAPPGKHV MSCFVQYAPY HLASGNWDEK KEAFGDTVID TLSQYAPNIK NIIVGRQVVT
PLDLEREWGL TEGNIFQGEL SLEQLFFLRP VPGWAQYRTP IKNLYMCGSA THPGGGIMGA
PGRIAALEIL KDWKA