Gene Acid345_1245 details

Gene Information

• Locus tag: Acid345_1245
• Symbol: rplO
• ID: 4069820
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Koribacter versatilis Ellin345
• Kingdom: Bacteria
• Replicon accession: NC_008009
• Strand: +
• Start bp: 1521895
• End bp: 1522329
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637983254
• Product: 50S ribosomal protein L15
• Protein accession: YP_590321
• Protein GI: 94968273
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0200] Ribosomal protein L15
• TIGRFAM ID: [TIGR01071] ribosomal protein L15, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.0277502
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 3
• Fosmid unclonability p-value: 0.00267047
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGAATCTCA GTAATCTGCG GGCTCCCCGC AAAGCCAACG AAAAGAAGAA GCGCGTCGGA 
CGTGGTATGG GTTCGGGCAT GGGCAAGACC TCCGCTCGCG GCCACAAAGG TCAGCGTTCG 
CGCAGCGGTT CGCGCATGAT GCGCGGTTTT GAAGGCGGCC AGATGCCGCT GCATCGCCGC 
TTGCCGAAGC GCGGTTTCAC CAACATCTTC CGCGTGGAAT ACGCGGTGGT GAATCTCGAC 
CGGCTCGCCG AACTCGGCCT GACGGAAATC ACGCCTGAAG TTCTGATCAA GCACAAGCTC 
GCCGGCAAGA ACGATAAGAT CAAGGTGTTG GGCAACGGCG AGATCAAGGG CGCGGTCACG 
GTTCGTGCAC ACAAGTTCTC CAAAACAGCC GAAGAAAAGA TCGCCAAAGC GGGCGGCAAG 
GCTGAGGTCC TCTAA 

 

Protein sequence

MNLSNLRAPR KANEKKKRVG RGMGSGMGKT SARGHKGQRS RSGSRMMRGF EGGQMPLHRR 
LPKRGFTNIF RVEYAVVNLD RLAELGLTEI TPEVLIKHKL AGKNDKIKVL GNGEIKGAVT 
VRAHKFSKTA EEKIAKAGGK AEVL