Gene Acid345_1243 details

Gene Information

• Locus tag: Acid345_1243
• Symbol: rpsE
• ID: 4069818
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Koribacter versatilis Ellin345
• Kingdom: Bacteria
• Replicon accession: NC_008009
• Strand: +
• Start bp: 1521033
• End bp: 1521542
• Gene Length: 510 bp
• Protein Length: 169 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637983252
• Product: 30S ribosomal protein S5
• Protein accession: YP_590319
• Protein GI: 94968271
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.00969773
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: 3
• Fosmid unclonability p-value: 0.0030984
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGGCAACAG TGAAGAAAAA GCTCGATGCA GGCCAGTTCA ACCTGAAGGA CCAGGTAGTG 
GCCATCAACC GCGTGACCAA GGTGGTCAAG GGCGGTAAGA ACCTGTCGTT CGCAGCGCTG 
GTAGTCGTGG GCGATCCCTC GGCTGCGGTC GTGGGCTACG GTTCCGGCAA GGCGAAGGAA 
GTTCCGCAGG CGATCCGTAA AGGGATCGAG TCCGCGAAGA AGAACCTGGT GAAGGTGAAC 
CTGAGCCAGA CTTCGATTCC GCACCAGGTA CTGGGCCGCT ATGGTTCGGG CCGTGTGATG 
TTGAAGCCGG CGCCGGAAGG CACGGGCGTC ATCGCGGGCG GCGCGGTGCG TGCAGTGATG 
ACTTCGGCGG GCGTGCAGAA CGTGCTGACC AAGTCGATCG GCACCACGAA CCCACACAAC 
GTGATCAAGG CGACCTTCGA AGCACTCAAG CAGTTGCGTG ATCGCCGCGA AGTCGCGGCC 
GGACGCGGCA AGACGGTAGA GGAGCTCTAA 

 

Protein sequence

MATVKKKLDA GQFNLKDQVV AINRVTKVVK GGKNLSFAAL VVVGDPSAAV VGYGSGKAKE 
VPQAIRKGIE SAKKNLVKVN LSQTSIPHQV LGRYGSGRVM LKPAPEGTGV IAGGAVRAVM 
TSAGVQNVLT KSIGTTNPHN VIKATFEALK QLRDRREVAA GRGKTVEEL