Gene Acid345_1242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1242 
Symbol 
ID4072633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp1520581 
End bp1520955 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content59% 
IMG OID637983251 
Product50S ribosomal protein L18P 
Protein accessionYP_590318 
Protein GI94968270 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0256] Ribosomal protein L18 
TIGRFAM ID[TIGR00060] ribosomal protein L18, bacterial type 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0425166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0030984 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCATTA AAGAAGCAAA AGATGCAAAG CGGGGCCGGG TACATTCCCG CATCCGCAAA 
AAGATGGAAG GTACGCCGGA GCGTCCGCGC CTGAACGTGT ATCGCTCTAC GAACCACCTG
TATGTGCAGG TCATCGACGA CAGCAAGGGC GCCACGCTGG TTGCAGCAAA CACGCTGGAG
TTTGGCGAAG CGAAGGAAGG CAAGCGTCCG ACGGGCGGCA ACCTGAGCGC AGCCAAGCAG
CTCGGCAAGG CGATCGCGGA GCGCGCCAAG CAGAAGGGCA TCAACAAAGT GGTCTTCGAT
CGCGGCGGTT ACCTGTATCA CGGGCGCATC AAGGCGTTGG CCGATGCAGC ACGTGAAGGC
GGACTAGAGT TCTAG
 
Protein sequence
MIIKEAKDAK RGRVHSRIRK KMEGTPERPR LNVYRSTNHL YVQVIDDSKG ATLVAANTLE 
FGEAKEGKRP TGGNLSAAKQ LGKAIAERAK QKGINKVVFD RGGYLYHGRI KALADAAREG
GLEF