Gene Acid345_1233 details

Gene Information

• Locus tag: Acid345_1233
• Symbol: rplP
• ID: 4072624
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Koribacter versatilis Ellin345
• Kingdom: Bacteria
• Replicon accession: NC_008009
• Strand: +
• Start bp: 1516506
• End bp: 1516925
• Gene Length: 420 bp
• Protein Length: 139 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637983242
• Product: 50S ribosomal protein L16
• Protein accession: YP_590309
• Protein GI: 94968261
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0197] Ribosomal protein L16/L10E
• TIGRFAM ID: [TIGR01164] ribosomal protein L16, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 2
• Fosmid unclonability p-value: 0.000804114
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGTTAATGC CCAAGAAAGT GAAGTACCGC AAGCAGCAGC GCGGACGCAT GCGCGGCAAA 
GCTTGGCGCG GCTCCGAGTT GAGCTTCGGC GATTTCGGCT TGAAGGTGTT GGAGCCGGGC 
TGGATCAGCG ACCGCCAGAT TGAAGCGAGC CGTGTTGCTA TGACGCGCTT CATCAAGCGC 
GGCGGCAAGA TCTGGATCCG CCTCTTCCCG GACAAGCCGG TAACCAAGAA GCCGGCCGAA 
ACCCGTATGG GTAAGGGCAA GGGCGCGCCT GATCATTGGG TCGCCGTCGT CCGCCCCGGC 
AAGATCCTGT TCGAAATGGA AGGCGTTTCG GTGACGGATG CTGCCGAGGC AATGCGCCTG 
GCCGCCCACA AGCTGCCGTT GCGCACGAAA TTTGTGGCGC GCGAGACGTC GGCGCACTAG 

 

Protein sequence

MLMPKKVKYR KQQRGRMRGK AWRGSELSFG DFGLKVLEPG WISDRQIEAS RVAMTRFIKR 
GGKIWIRLFP DKPVTKKPAE TRMGKGKGAP DHWVAVVRPG KILFEMEGVS VTDAAEAMRL 
AAHKLPLRTK FVARETSAH