Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1226 |
Symbol | rplC |
ID | 4072617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 1512255 |
End bp | 1512989 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637983235 |
Product | 50S ribosomal protein L3 |
Protein accession | YP_590302 |
Protein GI | 94968254 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0087] Ribosomal protein L3 |
TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0600156 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000985108 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGATTAACG GATTGATTGG AAAAAAGATC GGCATGACGC AGCTCTTCGA CAGCAAAGGC GATGTTCGCC CTGTCACGGT GCTGCAGGCC GGTCCCTGTG TGATTACGCA GCGCAAGACG GCAAACAAGG ACGGCTACGA TGCCGCCCAG GTCGGACTCG TTGAGTTCGT GAAGGAGACG CGCCTGACCA AGGCCCAACT CGGCCACCTC GGGAAGAATG ATCTTCCCCC GGTGCGCACC CTGCACGAGT TTGCGATCGT CGCGGACGGA CCCAGCGAAG CGGAGTCGAA CGGCGAAGTG AAAGTCGGCG ACAAGGTGCT GGTCGATCTC TTCGAGGGAT CGAAGTTCGT CGATGTGACG GGCGTGAGCA AGGGCCGCGG TTTCGCGGGC GTGGTGAAGC GCCATAAGTT CGCTGGCGGC GCCCGGTCGC ACGGTTCGAT GTTCCAGATC TCGGGTTCGA TCGGTTCGTC GGCGTTCCCG TCGCGCGTGT TCAAAGGCAT GCGCATGGCC GGTCACATGG GCCAGGACCA GGTGACGGTC CGCAACCTGC GCATCCTCGG CATCGACAAG GACGAAAACC TGTTGGTGGT CGAAGGCGCG GTTCCGGGAC CGAAGGACGC TACGGTGTTC ATCACCATGT CGAAGAAACC GCCGAGAGAG CGTCGTGGAT TCGCGGGTTC GAGCACGGTT GACCCGTTGA AGGCTTCGAA GCGCGCGGTT GCGAAGAAGA AGTAG
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Protein sequence | MINGLIGKKI GMTQLFDSKG DVRPVTVLQA GPCVITQRKT ANKDGYDAAQ VGLVEFVKET RLTKAQLGHL GKNDLPPVRT LHEFAIVADG PSEAESNGEV KVGDKVLVDL FEGSKFVDVT GVSKGRGFAG VVKRHKFAGG ARSHGSMFQI SGSIGSSAFP SRVFKGMRMA GHMGQDQVTV RNLRILGIDK DENLLVVEGA VPGPKDATVF ITMSKKPPRE RRGFAGSSTV DPLKASKRAV AKKK
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