Gene Acid345_1222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1222 
Symbol 
ID4068562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp1507510 
End bp1507983 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content59% 
IMG OID637983231 
Product30S ribosomal protein S7 
Protein accessionYP_590298 
Protein GI94968250 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0049] Ribosomal protein S7 
TIGRFAM ID[TIGR01029] ribosomal protein S7, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000188964 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00370144 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCTAGAA AAGGTCATAT TGCGAAGCGC GAGCCACTGG CGGATCCGGT CTACGGTTCC 
ACCCTGGCCA ACAAGTTCGT GAACTCGATG ATGTGGGACG GCAAGAAGAG CACCGCGCAG
GGCATCTTCT ACGAAGCGAT GAAGAAGCTC GAAGCCAAGG GCGGCGGAGA AGAGGCCATC
AAGTTGTTCA AGAAGGCCGT CGAGAACGCC AAGCCGTTGC TCGAAGTCAA GACTCGCCGA
GTCGGTGGCG CGAACTACCA GGTGCCGGTG GAAGTGAATG CCGACCGCCG CACGTCGCTG
GCGATTCGCT GGCTGATCTC GTACTCGCGT GGGCGTGGCG AGAAAGGCAT GATCGATAAG
CTCGCCAACG AGCTGCTCGA TGCGGCCAAC GGCCGTGGCG CCGCGATCAA GAAGAAGGAA
GACGTACACC GCATGGCGGA AGCCAACAAG GCGTTCGCTC ATTACCGTTG GTAA
 
Protein sequence
MPRKGHIAKR EPLADPVYGS TLANKFVNSM MWDGKKSTAQ GIFYEAMKKL EAKGGGEEAI 
KLFKKAVENA KPLLEVKTRR VGGANYQVPV EVNADRRTSL AIRWLISYSR GRGEKGMIDK
LANELLDAAN GRGAAIKKKE DVHRMAEANK AFAHYRW