| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1193 |
|---|
| Symbol | |
|---|
| ID | 4072605 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 1473275 |
|---|
| End bp | 1474009 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637983203 |
|---|
| Product | DNA repair protein RecO |
|---|
| Protein accession | YP_590270 |
|---|
| Protein GI | 94968222 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
|---|
| TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAAGC AATCTGAGGC GATTGTCCTC CGCACCTATC CAATGCGCGA GGCCGATCTG
CTGGTGACGC TGTTTACCCG CGCGGAAGGC AAAATCAAAG GCGTGGCGAA AGCGGCCAAG
AAGTCGCGCC GCCGGTTTGG CGGGGCACTC GAACCGCTGA CGCATGTGCG GGTGTATTAC
GAAGATCGCG AGCGACAGGA ACTGACCCGG TTGGACTCGT GCGATGTGCT GGCGAGTCCG
ATGTCGGCAG AGGTGGATTA TCCGCGAGCG CTGGCGTTAG GGCACGTCGC CGAAGTCATC
GACGACCTGC TGCCGGACCG CGAGCCGAAT GACGCGGTTT TCCGGCTCTC GTTGGCGGTG
CTGGGACAGT TGGTTCCCGG AGCGGTCTGG ATGCCGCTGA CGTATTTCGA TCTTTGGATG
GTGCGGCTGG CAGGCTTTCT TCCCGACCTG ATGCATTGCG TGGTCTGCGG AGAAGAGCTG
GATGACCGGG CGTTCTTCCA TCCGCTGGTG GATGGCCTGG TGTGCGCGAA CGATAAGCGC
CTGGCCTCAA CCGAGTTGAC GGTGGAATCG CGCGCCATCG CGGATTTGAT GTTTCGGGCC
CCGTTAGAGA ATTTTGCCGG CGCGCCATGG CCGCGCCAAC GTTGTGCCGA CTTACGCCGC
TTCTTGGTGC AAATCCTGGA GCGGCACTTA GAAAAGAAGC TGGTCACCGT GACCATGCTC
GACAAATTGG ACTGA
|
|---|
| Protein sequence | MLKQSEAIVL RTYPMREADL LVTLFTRAEG KIKGVAKAAK KSRRRFGGAL EPLTHVRVYY
EDRERQELTR LDSCDVLASP MSAEVDYPRA LALGHVAEVI DDLLPDREPN DAVFRLSLAV
LGQLVPGAVW MPLTYFDLWM VRLAGFLPDL MHCVVCGEEL DDRAFFHPLV DGLVCANDKR
LASTELTVES RAIADLMFRA PLENFAGAPW PRQRCADLRR FLVQILERHL EKKLVTVTML
DKLD
|
|---|
| |