| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1176 |
|---|
| Symbol | |
|---|
| ID | 4072917 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 1460190 |
|---|
| End bp | 1460777 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637983186 |
|---|
| Product | orotate phosphoribosyltransferase |
|---|
| Protein accession | YP_590253 |
|---|
| Protein GI | 94968205 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0461] Orotate phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR00336] orotate phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCATC GCGGCGAACT CCTGTCGTTA TTGGCCCAGA AGAGCTTTGC CTTGGGGCAG
TTCAAGCTCT CTAGCGGGGG CACCAGCGAC TACTACGTGG ATTGTCGGGT TACGACCCTT
AGCGCCGCCG GCGCCCACCT GACCGGTCTG GTTTTCCTCA ACGAAATCCG CAATCGCGGG
TGGAACCCTG CGGCGATTGG CGGACTGACC ATGGGCGCCG ACCCGATTGT GACCGCCGTC
TCCATTGCCA GCGTGCTTGA GGGTACTGGC GAGATCGAGG GCTTTCTCGT GCGTAAGGCC
GAGAAAGAAC ACGGCATGAA GAACCGCATT GAGGGCTTCA AAGGCAAAGG CTCGCGCGTC
GTGATCGTGG ACGACGTATG CACCACCGGC TCTTCGACGA TCCAGGCCAT TGCTGCCGCC
CGCGAGTTCG GATTCGAGGT CACAGGCGTG ATGTGCCTGG TAGAACGGTT GGAAGCGATG
GGTCGTCCGG CGGTGGAATC CGAAGCCGGC GGCGCGCCGT TCGTCTCAGT TTTCACCTCC
GACGAGGTTC GTGTGAGACA CGTTGAATTG AAGGGCGCGG CGAAGTAA
|
|---|
| Protein sequence | MNHRGELLSL LAQKSFALGQ FKLSSGGTSD YYVDCRVTTL SAAGAHLTGL VFLNEIRNRG
WNPAAIGGLT MGADPIVTAV SIASVLEGTG EIEGFLVRKA EKEHGMKNRI EGFKGKGSRV
VIVDDVCTTG SSTIQAIAAA REFGFEVTGV MCLVERLEAM GRPAVESEAG GAPFVSVFTS
DEVRVRHVEL KGAAK
|
|---|
| |