Gene Acid345_1174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1174 
Symbol 
ID4072915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp1458287 
End bp1458937 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content56% 
IMG OID637983184 
Productisochorismatase hydrolase 
Protein accessionYP_590251 
Protein GI94968203 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.910338 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGTTTC CAAGATGCCT GATTAGATGC ACGTTACGAC GCATCGCTTC ATGTGCCAAA 
ATTGGATTCA TGCCGAAAGT TGCAGTAGTG GTGATCGACG TCCAGGAGGG AATTCTCGCC
GGAATTTCAC GCCGACGTCC GGAAGAGACT GAGAGGGCGC TGGATGCCTG TGTCTGGCGG
ATCAGCGAGC TGCTCAAGCG AGCGCGCGCG GCAAAAGTAC CGGTGATTTA CGTCCAGCAT
GAAGGCGGAG TCGGCCATCG CCTGGAGCCC GGCAGCGCCG GGTTTCCGAT CCGCGAAGAA
ATTCAGCCCA AGCGCGGGGA AGTCATCGTT CACAAGAAAT TCTGCGATTC GTTTTTCGAA
ACCAGCTTGC TGGACGAGCT GAAGAAACTT GGCGCCGAAC AACTGGTTAT CGCTGGATGC
ATGACGCAGT ACTGCATCGA CACTTCCACA CGGCGTGCGG TTTCCGTTGG GTTCGACGTG
ACTCTTGTTG CCGATGGCCA CATGTGTGGC GACACCCGAA CGCTCACATT CGATCAAATC
ATTGCGCATC ACAATGCGCT GCTGGATGGG TTTGATGCCG GAGGAAAAAG CGTGACGGTG
AAACCCGCGG CGGAGATCGA CTTTGCTAAC GCAAGCGTCG CGACGTCCTG A
 
Protein sequence
MWFPRCLIRC TLRRIASCAK IGFMPKVAVV VIDVQEGILA GISRRRPEET ERALDACVWR 
ISELLKRARA AKVPVIYVQH EGGVGHRLEP GSAGFPIREE IQPKRGEVIV HKKFCDSFFE
TSLLDELKKL GAEQLVIAGC MTQYCIDTST RRAVSVGFDV TLVADGHMCG DTRTLTFDQI
IAHHNALLDG FDAGGKSVTV KPAAEIDFAN ASVATS