| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1164 |
|---|
| Symbol | |
|---|
| ID | 4072905 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 1448280 |
|---|
| End bp | 1448969 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637983174 |
|---|
| Product | butyryl-CoA:acetate CoA transferase |
|---|
| Protein accession | YP_590241 |
|---|
| Protein GI | 94968193 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
|---|
| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACGG CTCCGAACAT CAATAAGCAG AAGGACCACG AAAAGCGTGA GCGCATCATC
CGCCGCGTGG CGCGCGAACT CCGCGACGGC TACTACGTGA ACCTCGGCAT CGGTATGCCG
ACGCTGGTCG CGAACCACGT GCCGGCGGGT GTGCAAGTCG TATTGCAATC CGAGAACGGC
ATGCTTGGTG TTGGGCCGTA TCCGTATCCC GGCGACGAAG ATCCTGACCT CATTAACGCC
GGTAAAGAGA CAGTCACGGA GCTTCCGGGA ACGTCATATT TCTCCAGTGC CGATTCCTTT
GCGATGATTC GCGGCGGGCA TATCGATCTC AGCGTGCTCG GCGCGATGGA AGTGGACGAA
GAGGGCAACC TCGCGAATTG GATGATCCCC GGCAAAATGG TGAAGGGCAT GGGTGGCGCC
ATGGATCTCG TTGCCAGTGC ACGCCGCGTG GTCGTCGCCA TGGAACACAC GACCCGAGAA
GGTTCGCCCA AGATTTTGAC GAAGTGCACC CTGCCGATTA CCGGACTGAA GGTTGTGAAC
ACCATCGTTA CCGAGATGGC CTACATCCGA GTGACCGATA AAGGTCTCGT ACTCGAAGAA
GTTGCGCCAG GACTCACGGC GGACGACGTG CAAAAGGCGA CCGGACCGAA ACTGATTGTG
AGCGAGAAAT TGAGAACTAT GGAGTTTTAA
|
|---|
| Protein sequence | MSTAPNINKQ KDHEKRERII RRVARELRDG YYVNLGIGMP TLVANHVPAG VQVVLQSENG
MLGVGPYPYP GDEDPDLINA GKETVTELPG TSYFSSADSF AMIRGGHIDL SVLGAMEVDE
EGNLANWMIP GKMVKGMGGA MDLVASARRV VVAMEHTTRE GSPKILTKCT LPITGLKVVN
TIVTEMAYIR VTDKGLVLEE VAPGLTADDV QKATGPKLIV SEKLRTMEF
|
|---|
| |