| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1158 |
|---|
| Symbol | |
|---|
| ID | 4069967 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 1443750 |
|---|
| End bp | 1444976 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637983168 |
|---|
| Product | tryptophan synthase subunit beta |
|---|
| Protein accession | YP_590235 |
|---|
| Protein GI | 94968187 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0133] Tryptophan synthase beta chain |
|---|
| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.723967 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACCA AACCAATCGC GAAAGTTCGT AAGTCGGTAC CAAAGAAAGT TGAGTCGCAG
GTCGGCTACT TCGGCTCGTA TGGCGGACGC TTTGTCCCCG AGACTCTGAT GGCCGCACTC
CAGGAGCTTG AGGCTGCCTA CGAAGCAGCC AAGCGCGACA AGAAGTTCAA GGAAGAAATC
GAGTCGCTGC TGCGTGAGTA CGCGGGACGT CCGACGCCCC TGTTTTTGGC CAAGAATCTT
ACGCAGAAAC TGGGCGGGGC GAAGATTTAC CTGAAGCGCG AAGACCTTCT CCACACAGGC
GCCCACAAGA TCAACAACTG TATCGGTCAG GGGCTGCTCG CGCGCCGCAT GGGCAAGCAC
CGCATTATCG CCGAGACGGG CGCTGGACAG CATGGAGTCG CCAGCGCGAC GGTTGCCGCA
CTTTTCGGCA TGGAGTGCGT GGTTTACATG GGCAGCGAGG ACGTCCGACG GCAGGAACTG
AACGTCTTCC GGATGAAGTT GCTCGGGGCA GAAGTCGTCT CCGTCAACTC CGGTTCGCGC
ACACTAAAGG ACGCCATCAA CGAAGCCATG CGCGATTGGG TTACAAACGT CCGCACCACG
CATTACCTGC TGGGCAGTGT GCTGGGCGCA CATCCGTATC CGATGATGGT CCGCGACTTC
CATCGCGTGA TTAGCCGCGA GGCCAAGGCG CAGATCATGA AGGCCGAGGG CAAGCTGCCG
ACCGCGATCA TCGCTTGTGT GGGCGGAGGA TCCAACGCGA TTGGCGCGTT CTACGAGTTC
ATCGGCGACA AAAAGGTCCA GCTCATCGGC GTGGAGGCTG GCGGTCGCGG CAAAGCGCTG
GGCGAACATG CCGCACGCTT CCGCGGTGGA GCACCAGGCG TGCTTCAGGG CACGTATTCT
TACGTCCTTC AGGATGAACA CGGCCAGATT GCTGGCACGC ATTCGGTGTC GGCGGGATTG
GATTACCCGG CGATTGGTCC GGAGCACGCC GCTCTTGCCG AAGCGGGACG CGCCGAGTAT
GTAGCCGCCA GTGACGCAGA AGCGCTTGCA GCGTGCAGTA TGCTTGCTAA GACGGAAGGC
ATTATTCCGG CACTGGAGTC GTCGCACGCG GTGGCGGAGT GTGTTCGCCG CGCGCCGCAG
ATGCGTAAGA GTGACGTCGT CATCGTCAAT ATCTCGGGAC GAGGCGATAA AGACATCGGT
ATTCTCCGAG AGCAACTTCG GTTTTAG
|
|---|
| Protein sequence | MATKPIAKVR KSVPKKVESQ VGYFGSYGGR FVPETLMAAL QELEAAYEAA KRDKKFKEEI
ESLLREYAGR PTPLFLAKNL TQKLGGAKIY LKREDLLHTG AHKINNCIGQ GLLARRMGKH
RIIAETGAGQ HGVASATVAA LFGMECVVYM GSEDVRRQEL NVFRMKLLGA EVVSVNSGSR
TLKDAINEAM RDWVTNVRTT HYLLGSVLGA HPYPMMVRDF HRVISREAKA QIMKAEGKLP
TAIIACVGGG SNAIGAFYEF IGDKKVQLIG VEAGGRGKAL GEHAARFRGG APGVLQGTYS
YVLQDEHGQI AGTHSVSAGL DYPAIGPEHA ALAEAGRAEY VAASDAEALA ACSMLAKTEG
IIPALESSHA VAECVRRAPQ MRKSDVVIVN ISGRGDKDIG ILREQLRF
|
|---|
| |