Gene Acid345_1156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1156 
Symbol 
ID4069965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp1442302 
End bp1443084 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content60% 
IMG OID637983166 
Productindole-3-glycerol phosphate synthase 
Protein accessionYP_590233 
Protein GI94968185 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0134] Indole-3-glycerol phosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.721483 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCGA CCCTACAGGC GATCCTGGAC GACACCCGGC GTGATCTCGC GGCCCGGAAG 
TCGGCTGCGC GGACCAAAGA GTTCGAAAAG CGAGCCGCGG AGCATACACC GCGCGGATTT
CGCACGGCAC TGTGGGAGCG TGCCCAGGCC GGCGTCGCCG TGATCGCGGA GTTGAAGAAG
GCGTCGCCGT CGAAGGGGCT GATTCGGGCG AACTTCGACG TGATAGCTCT AGCAAAAGAG
CTAGAAGAAG CGGGTGCTGC GGCGCTTTCA GTGCTTACCG ACGTTCCGCA CTTCCAAGGA
TCGCTGGAGA ATCTGGAACG CGCGTCGCAG ACGGTGAGGA TTCCATGCCT GCGCAAGGAC
TTCATCCTGG ATCCGGCGCA GATCGTAGAG GCTCGCGCCT ATGGGGCGGA TGCGATCCTG
CTGATTGTCG CGGCGCTCAC CGACTTGGAT TTGCGCAATC TTCGCGACGA GGCCAAGCGT
TACGGTCTCG ATGTTCTTTG CGAAGTCCAC GATCGCGATG AGCTGAAACG TGCCGCTGAC
CTGGGTTTCG ACCTAATTGG CGTGAATAAC CGGAACCTGA AGACATTTCG CGTGGATATC
GAGAACTCAC TGCGCTTTGC CGAGGAGTTT CCGCCGAATG CCCTGCGCGT TGCGGAGAGT
GGTATTCATA GCCGTGAGGA TATCGATCGC CTTCGAGATG CGGCTTACAG CGCGTTCCTG
ATCGGCGAAT CGCTGATGCG AGCGGATTCT CCCAGCGCCA CGCTGAGGGA GTTGATCGGC
TGA
 
Protein sequence
MSSTLQAILD DTRRDLAARK SAARTKEFEK RAAEHTPRGF RTALWERAQA GVAVIAELKK 
ASPSKGLIRA NFDVIALAKE LEEAGAAALS VLTDVPHFQG SLENLERASQ TVRIPCLRKD
FILDPAQIVE ARAYGADAIL LIVAALTDLD LRNLRDEAKR YGLDVLCEVH DRDELKRAAD
LGFDLIGVNN RNLKTFRVDI ENSLRFAEEF PPNALRVAES GIHSREDIDR LRDAAYSAFL
IGESLMRADS PSATLRELIG