| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1154 |
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| Symbol | |
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| ID | 4069963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 1440695 |
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| End bp | 1441546 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637983164 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_590231 |
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| Protein GI | 94968183 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.40288 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTTGC TTAGACATCT CGGCTTGGCA GGCATGGGCT TCGTTTTGGC CTGCGCTCCG
GCGTTTGCCG GCAGCATCTC TACCGTGGAT GTGGACGGTC GTAAGGTCTT CGTCAACGAC
GACGACCTTC CCAAGTTCAA GTCCGCCGAC GGCACTCCGA CACACTCCGC CAAGACGCTT
ATCTTCTGGA GTGGGACAGA ACACCGCTGG AAGCCTGTAC CGCACCAGAA TCCAGCCGCG
ATCGAAGCTG CCCGCAGTGC TGCAGCCGAC GTAAAGAACT TCGTTGCTTC GCAACCGACG
CAGAAAGAAG ATCCCGTTAA GGGCGTGGTC GACACGGCGG ATAAAGACCC GAACTTCGGC
AAGATTGCGA AGGGCTATGC CGTGACCACC GCGGAGGTGG AGCAAGCCAT CGCCGATGCG
GCGGCCAATC ACGGCGTCGA TCCCAACCTC GTGAAGGCGA TCATCAAGGT CGAATCGAAC
TTCAACCCGC ACGCCGTTTC CAACAAGGGC GCCATGGGCC TGATGCAACT CATGCCGGGC
ACCGCCCGCA AGTTGAACGT CAGCAACCCG TTCGACGTTC ACCAGAATGT GGACGCAGGC
GTGAAGCACT TCCGCCAGTT GCTGGAAGAT TTCAAAGGCG ATGTGAAGCT CTCGCTCGCT
GCCTATAACG CGGGTGAAAA AGCAGTTACC GATCACGGTG GCATTCCGCC CTACCAGGAA
ACCCAGAACT ACGTGAAGAC GATCACGCGC CTCTACAACG GCGGCATGAA TATCCAGTTC
GCTCCCACGC GCGCACCGAT CAAGGTGTAC CGTGACCAGC AAGGTGTCCT GACCTTCAAT
AACGTTGACT AA
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| Protein sequence | MTLLRHLGLA GMGFVLACAP AFAGSISTVD VDGRKVFVND DDLPKFKSAD GTPTHSAKTL
IFWSGTEHRW KPVPHQNPAA IEAARSAAAD VKNFVASQPT QKEDPVKGVV DTADKDPNFG
KIAKGYAVTT AEVEQAIADA AANHGVDPNL VKAIIKVESN FNPHAVSNKG AMGLMQLMPG
TARKLNVSNP FDVHQNVDAG VKHFRQLLED FKGDVKLSLA AYNAGEKAVT DHGGIPPYQE
TQNYVKTITR LYNGGMNIQF APTRAPIKVY RDQQGVLTFN NVD
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