Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1142 |
Symbol | |
ID | 4069913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 1420799 |
End bp | 1423570 |
Gene Length | 2772 bp |
Protein Length | 923 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637983152 |
Product | hypothetical protein |
Protein accession | YP_590219 |
Protein GI | 94968171 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.66569 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCACGC GCGCCCGACT GACGAAGGAG GCGGCCCCGA CCAAGGCCGC AACTCCAGCA AAGAAAGCGA CGAATTACTA CTCGCAGGAA ACTCAAAGAG AGGGCGTCAG CGCCGAATAT TCGTTCTCCC TGGCGGGACT GCGGCTTTTC TCCGGCGCAC AAGACGACGG CAGCAGCAAT TCTGAAGATT TCTCGCCGCT CCTGCCGATC CAGGCAAAGC TCGACGTAGG AGAAGTTGAC GATCCGCTCG AGGCCGAAGC TGACCGCACT GCGGACGCTG TAATGAAGTC GCCATCCCCT GCCCCACCGA CCTCTCCTGC AGCCCATTCC TCGGAGCAGA AGAAATGCGA GTGCGGCGGG ACGTGCGAGA AATGCCGTGG CCAACAGCAG CCGGAACCTG TGAAGCTGCA GAGGAAACCC GCGGCGGCGG GAAGCCTTCG GCTCGCCGCT GCGCCGCCGA TTGTCCACGA AGTATTGCGG TCGGCGGGCC AGCCGCTCGA TCCGCAGACT AGAAGCTTCT TTGAACCGCG CTTTGGCTAC GATTTCAGTC GCATACGGGT GCATCGAGAT GCGCAGGCGG CCGAATCAGC CGAAGCCCTG CATGCTAAGG CTTACACCGT CGGGCGCGAC ATCGTCTTCA GCGGGCGTGC GCCCTCGTCG GATGGGCCGG AGGCCCGGAC TCTAATGGCC CACGAGTTGA CCCATGTCGT TCAGCAGAAC GTGGGCTCCG TGGTCCTGCG CCGCTCCCCC GACAAACGAT GGAAGACCGA CGTTTCCGCT GCAAAATATC GCGGTCAGGT GATGTCTGCC CGCATCCGTC GTCACGGAAA GCTCTCGCAG GAGGCGCGCG AGAAAGTCAA CAGTGAGCTG GCATTTTTCG AAGGTGCAGC CAAAGACGCC TATCTGAAAG AAGTGAAACC CGCGCTCCAC GAGGTGGTTG AGATCGAAAT GCCGGAAATG AACATGGCCC GGCCCATCCA TCCGCCCAAG CCGATGACAT TGATGCCTCT CAATGAAGAC CCGAACATTT GTGGACCGGG CGGCTGCAAG AGCGACGAGG ACTTGGGGAT CGCCCCGCCA GCACCGGTTG ATCCGGTCAA ACAAGAGTTC GAACTACGCA AGGAGTTGAA CCTGGGGGAT CTCGACACAG AGATGGTGGG CTGGTCTGAA GCTGACCAGA AATTCGCGAG AGAACTTGTC ACCCAGCTCC TCGATCAACG AATCAGACCA GAAAACATGC CCAGCGCGAT CCGCGGCCCT GTCCTTGAGC GATACCTCGA GTGGATGAAA CTGGTGGACG CCGAGCGGCA CAAGCAATGC GATCCCAACC GAGGAGGAAT TGCCACCGCG AGGGCGACGG CGAGCAATGA CGATCCCTGC AAGTCGTGGT TTTCTCCAGA GTCGGGACAC GCCGAGAACG AATTGCAGTC GCTCGAGAGG ACGTTGAAGC TCACAGTCAA AGCCGACCGC AATGCAACTC CGTCCCAGGA GGTTTACTGG TCGGTGTTCG AGTATCGAAA ACTCACCGAT CCCAAAATGC TGGAATCGGC TCAAATCGCA GGTGAAATGG TTGGGGGACT CGTGGCATTC GTCGACTTAG TGAATGTCAC CATGGCGTCG TACCCGGTAA AACTTGGAGA AAATCCAACG ATCAGCACGC CCCCGAGGCT CTCCGGCACT ACGCAGGTGG ATCCCCCGGT CACTCCGAAA GTTCCTGCAA AAACGGTCGT TCCTGACCCA CCGACCCCTC CGAAAGTTCC TGCAAAGACC GTCGTCCCGG ATCCACCAAC CACGCCGACG ACCGCGCCCA AAGTTGTGGA TCCTCCCAAT GTGAGCGGAA AAGTTGCCGA CGCAGATGCG GCGGCAGCCA CCGCGAAAAA GCAAACGCCT CCTCCGACGC GAACCACCGG CATAGACGAC GATGCGGCGC TGGGCAGCAA GGGCAGCGCC AAAGGTGCTC CAAAGGGAAA GAAAACCGCT GCTGACAACA AGCCCACAGA CAAACAAATG GTGTCCACGA AGGACAAAGG CAAAACCGCT CCCACGAAGG CGTCAAAAGA CGACCTCGAC GATTCGTCTG CACAAACCAA GGGAAGCAAG TCAGATGACG CGACGGGCGA CACCAAAACC AAGCCGGACA AACGAAAGAA GGTCCCTCCA CCCGAGAAGA AGCCTCCGAA AGACACGACA CCGCCGGTCA CCCGCAGCGG GCCCATGTCT CCCTCCGAGG AGCGGGTTCG AAATATCGCC GGAAAAGACA TTTATGTCGG CATGCGAGCC AGGATCAAGA TGAAAGGCGG CAAAGTCATA ACCAAGGGAC TGAGGAACAC GCGTTTCGAT CCGGTGGACC CAGCCCGTGC CCAGGCAATT GGCGGTAAGG ATCCCCGTGC TGCTCAGCTG CCGGAGGTCA CCGTGCCCTC CTACGCCGGT GCAAAGAAAG GAAGCCAGAA GTCCTCAGGA TTCGTGATCC AACCCGCAGA GGGCGCGGAC TCTCTGGAAG TGGTTGCGTG GAACTCGGGC GATCCTCTCC GCGAGAGCAA TATCTCCCAT GCCGAACGAC AGTTCATCGA CTGGTTCCGG GGTCAAGATG CAGGGTGGAC AAACCAAGTA GAGAGCGTGG AAGTCGAGGT CTTCGGGAGG GACATCTGTA CAAACTGCGA GTCGGACATA TCGGACCTGA AGCGCGGCTA TGACAAGGTC AAGTTCAAGT GGGACCGCAC CGACACCGGT CGCCCTTACA AACCCGAGAA CCCAAACCCG CCGACGAAAT AA
|
Protein sequence | MLTRARLTKE AAPTKAATPA KKATNYYSQE TQREGVSAEY SFSLAGLRLF SGAQDDGSSN SEDFSPLLPI QAKLDVGEVD DPLEAEADRT ADAVMKSPSP APPTSPAAHS SEQKKCECGG TCEKCRGQQQ PEPVKLQRKP AAAGSLRLAA APPIVHEVLR SAGQPLDPQT RSFFEPRFGY DFSRIRVHRD AQAAESAEAL HAKAYTVGRD IVFSGRAPSS DGPEARTLMA HELTHVVQQN VGSVVLRRSP DKRWKTDVSA AKYRGQVMSA RIRRHGKLSQ EAREKVNSEL AFFEGAAKDA YLKEVKPALH EVVEIEMPEM NMARPIHPPK PMTLMPLNED PNICGPGGCK SDEDLGIAPP APVDPVKQEF ELRKELNLGD LDTEMVGWSE ADQKFARELV TQLLDQRIRP ENMPSAIRGP VLERYLEWMK LVDAERHKQC DPNRGGIATA RATASNDDPC KSWFSPESGH AENELQSLER TLKLTVKADR NATPSQEVYW SVFEYRKLTD PKMLESAQIA GEMVGGLVAF VDLVNVTMAS YPVKLGENPT ISTPPRLSGT TQVDPPVTPK VPAKTVVPDP PTPPKVPAKT VVPDPPTTPT TAPKVVDPPN VSGKVADADA AAATAKKQTP PPTRTTGIDD DAALGSKGSA KGAPKGKKTA ADNKPTDKQM VSTKDKGKTA PTKASKDDLD DSSAQTKGSK SDDATGDTKT KPDKRKKVPP PEKKPPKDTT PPVTRSGPMS PSEERVRNIA GKDIYVGMRA RIKMKGGKVI TKGLRNTRFD PVDPARAQAI GGKDPRAAQL PEVTVPSYAG AKKGSQKSSG FVIQPAEGAD SLEVVAWNSG DPLRESNISH AERQFIDWFR GQDAGWTNQV ESVEVEVFGR DICTNCESDI SDLKRGYDKV KFKWDRTDTG RPYKPENPNP PTK
|
| |