Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1112 |
Symbol | |
ID | 4069227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 1388094 |
End bp | 1390301 |
Gene Length | 2208 bp |
Protein Length | 735 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637983121 |
Product | hypothetical protein |
Protein accession | YP_590189 |
Protein GI | 94968141 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000210473 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCGTCTCA AGCTTGCCGC GTTGTGTTCC CTACTCGTGC TGTCTCTTCC CGCGTTCGCC CAGCAGCCCG CCGCCGATCC TGCGGCATTG GCATCGACGG TACCGAACGT GATCCGATAT AGCGGGACCC TGCCGCACAG TGCCGGCAAG ACCGTTGGCA TTACCTTCAC CCTGCACAAG AACCAAACCG ATCAGGCGTC TCTCTGGATG GAGACCCAGA ACGTGATTGT GGACGCTACG GGTAAGTACA GCGTGCTCCT TGGTGCGACC AAGTCCACTG GCATGCCTGC GAACCTGTTT GCCACCGGAG AAGCGCGTTG GCTTGCCGTG CATGTGGATG GCGAATCCGA TGCTCGCGTC CTGCTCGTCA GCGTTCCGTA CGCGATGAAA GCTGCGGAAG CCGAAACCCT CGGCGGTCAC GCGCTCAGCG AATTCATCAC CGCCGATAAG CTAAGCGCCG CGGTGCGCGA GGAATTGAAG CTCTCGCCAT CGCAAGGATC GTTCAACGTG AAGAACGGCT CCGGCGCCAA GACGAACGTT GTCACCAATA CGGCCACGAA TTTTGCGGAC AACAACGCCA ACCAGGTTGT GCTGGTGACG CAGAGCGGTA CCGGCTCCGG ACTGGTCGCC AACGCGGCAT CCGGCAGCGG ATTGATCGGA ACCTCCGGCG GAGCGGCTGG CTTTGGAGTG AGTGGCTCCA ACACCGCGGT TACCGGTGTT CCCGTCGGTG TACGTGGAAC AACGGTCGCG GACAGCGGTA TTTCCATCTA CGGTACCGCG AGTGGAACCG GAGGCAGTGC GACTGGTGTG AAGGGCATTA CGGCGGCTCC CGCCGGTTAC GGTGTATTCG GACAGAACAC GGCGACCACC GGCCCGGCCG TTGGTTTCCG CGGCACGACC GCGTCTACAG CGGGTATCGG CATTTACGGT ACGGCCACTT CCGCTACCGG CACTACTACC GGTATTCGCG CGAACGTCGC GAGTCCGAAT GGCGTTGCGG CAGTGTTCCA GAACAGCGGC AGTGGGCAAT TGCTCAGCGG ACAAAGCGGC GCGTCGAACA CGGAGGTATT CAGCGTGAGT GGCGGGGGCG ACGTTGCCGC GAACTCGTTG AACCTGCCGG CAACTTCGGC GACCACCGGT TTCCTTGCAA TCGGAGGTCT TAAGGTCATG CTGGCTCCGG GAATTTCGGG AACCAACAAC TTCTTCGCAG GACAGGGTGC CGGGAACCCG ACGGTGAGTG GAAGCTACAA TGCCGGTTTC GGTGCGTTGT CGGCGTCCAA TCTCTCGTCG GGAATATTCA ACACCGCGAT CGGCTACGGC GCACTCTACA ACATCACCAC CGGAACGGAT AATACCGCCG TGGGTGTTGA GGCTGGGTAC CCGGGCGAGG TTACTGGGAG TGGCAACACT TACGTGGGCG CAGTAGCCGG CCCGTCAGTA GATGGCTTGT TCAGGTCTAC TGCACTCGGC ATCTTTGCCA AGGTTGGCAA ATCGCACGCC ATCGTGCTCG GCGACTCAAC CGACGCTGCG CTCACGTTGG GAATCGGAAC CCCGACTCCA AGCAGTACGC TGTCGTTCAA CGGTGACCGG ATCACCTCTA TCGCGCCGGA ACGGAGCAGT GGGTCCAACC CCGGCCAGCA ACTCGGGCTC TCGGGCGGCA GCGCGGCGGT GGGATCTACC GACATTGCTG GTGGAGACCT GGTGCTGGCG GCAGGTTATG GTACAGGCCT TGGGTCTGGA GGCAATCTCC GCGAGCAGAC TGGTAGCTCG GCGGCATTAA GCGGCACAGC GGACGGTCTG CTGGTGGACC GCCGTATCGT GGTGGCGCAC GGCAAGCAGT TGACCCTCTC TTCTCCCGGT TTCACCTCGC TCATGTCCAT CCACCTCGTC GGTACGAACA CGGCGGGTGG GCGTATCTAC TACACGATCC GCGCAACCGA CGGCGGTTCG CAGATCGCGA CCGAAGAAGG CGTGATCCAG TATCTCGCCA CGGCGAACTC CATCACCTGT ACGGTCCAGA CCACCGACAA GCTGCACTTG GGGACGGTGA ACTCAGGATG CACTCCTGGA TTCTTCAATC CCGGGAGTCA ACCAGGTGTC AGCATCTTCG ACAACGTGAG TTTCTCGTCG CCCGCGCCGA TCGTGGTGCA CGAGATCTAT TTCACAATCG ACAACGAGTC GGGATCGTCG ATCCGACTGG AACCGTAG
|
Protein sequence | MRLKLAALCS LLVLSLPAFA QQPAADPAAL ASTVPNVIRY SGTLPHSAGK TVGITFTLHK NQTDQASLWM ETQNVIVDAT GKYSVLLGAT KSTGMPANLF ATGEARWLAV HVDGESDARV LLVSVPYAMK AAEAETLGGH ALSEFITADK LSAAVREELK LSPSQGSFNV KNGSGAKTNV VTNTATNFAD NNANQVVLVT QSGTGSGLVA NAASGSGLIG TSGGAAGFGV SGSNTAVTGV PVGVRGTTVA DSGISIYGTA SGTGGSATGV KGITAAPAGY GVFGQNTATT GPAVGFRGTT ASTAGIGIYG TATSATGTTT GIRANVASPN GVAAVFQNSG SGQLLSGQSG ASNTEVFSVS GGGDVAANSL NLPATSATTG FLAIGGLKVM LAPGISGTNN FFAGQGAGNP TVSGSYNAGF GALSASNLSS GIFNTAIGYG ALYNITTGTD NTAVGVEAGY PGEVTGSGNT YVGAVAGPSV DGLFRSTALG IFAKVGKSHA IVLGDSTDAA LTLGIGTPTP SSTLSFNGDR ITSIAPERSS GSNPGQQLGL SGGSAAVGST DIAGGDLVLA AGYGTGLGSG GNLREQTGSS AALSGTADGL LVDRRIVVAH GKQLTLSSPG FTSLMSIHLV GTNTAGGRIY YTIRATDGGS QIATEEGVIQ YLATANSITC TVQTTDKLHL GTVNSGCTPG FFNPGSQPGV SIFDNVSFSS PAPIVVHEIY FTIDNESGSS IRLEP
|
| |