| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1088 |
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| Symbol | |
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| ID | 4069548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 1362941 |
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| End bp | 1365583 |
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| Gene Length | 2643 bp |
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| Protein Length | 880 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637983097 |
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| Product | ABC efflux pump, inner membrane subunit |
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| Protein accession | YP_590165 |
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| Protein GI | 94968117 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0674976 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTGT TTTCTTATCT CCGGGCTCTT CTCTCCCGCC CTTTCTCATC CACATCCAGC
GATATCAGCG ATGAGCTTCG CAGTCACCAA CAGTTGCGTG CCGACGATCT CCAACGCTCC
GGGTTGCCGC GAGATGAAGC CGAACGCCGT GCACGCATAG AGTTCGGCGG CGAGGTTCGT
TTTGAGGAAG AGTGTCACGA AGAAATTCCC GGGCACTTCT TCGAAATCCT CGTGCAGGAT
GCGCGCTTCG CTCTCCGCAT GTTCGGCAAG GCGCCCGGCT TCACGGTGGT CGCGATTCTC
ACCATTGCGA TCGGCATCGG CACCAACGCG GTCGTCTTCA GCGCGATGAA CGGGCTTGTA
CTCCGTCCCA TCAATGTTCC CGACGCCGGG AACCTTTCTA TGCTGGAGCA GAGCCGCGAC
CGCTCTCCGC AACAGTCCTA TCCCGATTAC CTGGATATAC GCGACCGGAC CCGTAACTTC
GACGGCATGA TCGCCTACAC CATCTCGCGC GTCGGCCTCG GCGCCGATGG CCACAGCGCC
CGCGCATGGC TCTACGAAGC CAGCGGGAAC TACTTCGATG TCCTCAGAGT GCAGCCCTAC
CTTGGCCGCT TCTTCCACGA GAGCGATGAA CACGGGCCCA ACAGCAGTCC ATACATCGTG
CTCAGCTACG CTTATTGGAA GAGTCACTTT CAGTCCGACC GCGGAGTTGT TGGGCGCACC
GTGGAAATGA ATACACAGCC CTACACGATC CTCGGTGTGG CGCCGCCCGG CTTCAACGGC
ACCGAACTGT TCTTCGCTCC CGACTTCTGG ACCCCCATCG TCAACCAGCA GCAAGTGGAT
GGGTGGAGCA ATCTCGACGG TCGCGCCGCG CGTGGACTTT GGATTATTGG ACGCGTACGT
CCCGGCGTCA CTCCGGCGCA GGCCACCGCA GACTTGAATG CGGTAGCCTC GTATCTTTCC
AAGACATATC CGAAGGATGA CGATCAGATT CACTTCACTC TGGTGCGTCC CGGCCTCCTG
GGAGACATGC TGGGTAAGCC CGTGAGCGCA TTTCTCGCGG GTCTTATGCT GCTCGCCAGC
CTGATATTGC TCGCAGCGTG TGCCAACCTC GGCAGCCTAT TCGCTGCTCG CGCCTCTGAC
CGCGCCGGCG AAATCGCGCT GCGCCTTGCC CTTGGGTCAA GCCGTCGCCG CATCCTGCGT
CAACTCTTCA CGGAGTCGGT CATGCTGTCG CTCATCGGCG GCATTGCTGG GATTGGCGGC
GGAATCGTCT TACTGCGCTG GCTGAACGTC TGGCGTCCGA TCTCCGATTT TCCGATCACA
CTGCAGGTCC TGCCGGATTT TCGGGTGTAC TTCGTTGCGT TCGTGCTGGC CTTGTTTAGC
GGGCTTATTT TCGGCGCTAT CCCGGTGCGC CAAGTCCTGC GCTCCAATCC CTACGAAGTC
GTGAAAGCCG GTTTCACCGG CGAGCGTCGT AGACGCCTTA CCGCGCGCAA CGTCCTGCTC
GTCTTTCAGA TCTCCGCTTG CGCTGTATTA GTTACTGCGT CGCTGGTCGC CGTCCGCGGG
CTGGTGCGGT CTCTGCATAG CAGCCTTGGG TTCGTCCCTG AGAATTCGCT GATCGCTGAC
ACCGATCTCG ATATGGCGGG CTACAACGAA GACACCACGC CAATCATGCA AAAGCGCCTT
ATTGAGACAC TCGCGACGGT TCCCGGTGTC AGCGCCGTGG GCATGGCAGA CCGTCTTCCC
CTCGCTCTGA ACGGGGCAAC CGCGGCTGTT TACAAGGACG ACACAGTCGA CTTCCGCGCC
TCCAACAGTC TCGGGGACGC CAGCTTTTAC AGCATCTCTC CGAACTATTT CCGCGCGGCA
GGCACCGCGT TTCTCGCGGG ACGAGACGTG GCCTGGCAGG ACAATCGCGA CGCCGTCCGG
GTAGCCGTGA TCAATCGGAG ATTTGCCGAC AAGATCTTCG GCTCCGTTGA CAAAGCCATC
AGCGGCCATT TCAAAATGAA CGAACGCCGT TACGAAGTGA TCGGTGTGGT CGAGGATGGA
AAATATCAAA CCCTCACCGA AGATCCGCAG TTCGCCACGT TCCTGCCGAT CCTTCAGGCA
CCCACAAGTT CCACTACGCT CGTCGTTCGC ACCACGCGCG ATCCCGCGCA GTCGGCCCCT
GAAGTCGACT ACACCCTTCG CAAGCTCGAT AGCAGGCTTC CGTTCGTGAT CAAAACGTGG
CCGCAACAAC TTGACAGCGC CCTTTTCGCG TCGCGTGTCG CTACGGTCGC GCTCGGTATT
CTGGGCGCAC TCGGAGCTAT GCTCGCGATC ACCGGCATCT TCGGCATGGC GTCCTATGCC
GTCTCGAAAC GCATGCGTGA GCTGGCAATC CGCGTCGCTC TCGGCGCCCA GAAGAAGCAG
GTCGCCTGGG CCGCGCTCGG TACACCACTG CGCCTTCTCG CGATCGGCTC GGTTATCGGA
CTTGTTCTAG GATTCGCCGC AACCGGCGTT CTTTCCTACG TGGTCTACCA GGCAACACCA
CGCGATCCGC TGGTCCTTTG CGGGGTTGTG TTCACCATGT CGTTGCTGGG CCTGCTCGCC
ACGTGGATCC CTGCCCGGCG CGCGCTTCGC TCTGAGCCGT TGCAACTGCT CCGCGAGCAA
TAG
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| Protein sequence | MSLFSYLRAL LSRPFSSTSS DISDELRSHQ QLRADDLQRS GLPRDEAERR ARIEFGGEVR
FEEECHEEIP GHFFEILVQD ARFALRMFGK APGFTVVAIL TIAIGIGTNA VVFSAMNGLV
LRPINVPDAG NLSMLEQSRD RSPQQSYPDY LDIRDRTRNF DGMIAYTISR VGLGADGHSA
RAWLYEASGN YFDVLRVQPY LGRFFHESDE HGPNSSPYIV LSYAYWKSHF QSDRGVVGRT
VEMNTQPYTI LGVAPPGFNG TELFFAPDFW TPIVNQQQVD GWSNLDGRAA RGLWIIGRVR
PGVTPAQATA DLNAVASYLS KTYPKDDDQI HFTLVRPGLL GDMLGKPVSA FLAGLMLLAS
LILLAACANL GSLFAARASD RAGEIALRLA LGSSRRRILR QLFTESVMLS LIGGIAGIGG
GIVLLRWLNV WRPISDFPIT LQVLPDFRVY FVAFVLALFS GLIFGAIPVR QVLRSNPYEV
VKAGFTGERR RRLTARNVLL VFQISACAVL VTASLVAVRG LVRSLHSSLG FVPENSLIAD
TDLDMAGYNE DTTPIMQKRL IETLATVPGV SAVGMADRLP LALNGATAAV YKDDTVDFRA
SNSLGDASFY SISPNYFRAA GTAFLAGRDV AWQDNRDAVR VAVINRRFAD KIFGSVDKAI
SGHFKMNERR YEVIGVVEDG KYQTLTEDPQ FATFLPILQA PTSSTTLVVR TTRDPAQSAP
EVDYTLRKLD SRLPFVIKTW PQQLDSALFA SRVATVALGI LGALGAMLAI TGIFGMASYA
VSKRMRELAI RVALGAQKKQ VAWAALGTPL RLLAIGSVIG LVLGFAATGV LSYVVYQATP
RDPLVLCGVV FTMSLLGLLA TWIPARRALR SEPLQLLREQ
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