| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1082 |
|---|
| Symbol | |
|---|
| ID | 4070042 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 1357979 |
|---|
| End bp | 1358551 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637983091 |
|---|
| Product | translation elongation factor P |
|---|
| Protein accession | YP_590159 |
|---|
| Protein GI | 94968111 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) |
|---|
| TIGRFAM ID | [TIGR00038] translation elongation factor P |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.314487 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0381782 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGGTT TGATTGATGC AATTAGCGTG AAACGCAAGA TGTTCTTCGA GCACGAAGGC
GTGCCGTACC ACTGTCTCGA CGCTGAAGTG AACACGCCCA CGGCGCGCGG CGGACAGACA
CTCGTCCGCC TGAAGATGCG CAACCTCCTC ACCCGCGCGG TGTTCGACAA GACCTTCAAG
GCCAGCGACA AGTTCAAAGA GCCCGATCTC GAAATGGTTC CCGCGTCGTT TCTCTACAGC
GACGCCGACG GCTTCTACTT CATGGATCAG GAAACCTTCG AGACCCACAC GCTTCGCGAA
GATATGATCG GCGACGCCGC CGACCTCCTC ACTGAAGGCC TCATCGTTCA GTTGAGTAAG
TACAACGGCA ATCCCATCGG CCTGGAGATG CCAACCTTCG TCGAACTCAC TGTGACGCAA
ACAGAGCCGG GCATGCGCGA TTCCGGCGCG GGCAGCGTGA CCAAAGCCGC AACGCTGGAA
ACCGGCGTCG AGATCCGCGT GCCGCTCTTC ATTAAAGAGG GAGAGAAAGT GAAAGTCTCC
ACCGAAACGC GCGGGTTCGC CGGCAGGGCA TAG
|
|---|
| Protein sequence | MAGLIDAISV KRKMFFEHEG VPYHCLDAEV NTPTARGGQT LVRLKMRNLL TRAVFDKTFK
ASDKFKEPDL EMVPASFLYS DADGFYFMDQ ETFETHTLRE DMIGDAADLL TEGLIVQLSK
YNGNPIGLEM PTFVELTVTQ TEPGMRDSGA GSVTKAATLE TGVEIRVPLF IKEGEKVKVS
TETRGFAGRA
|
|---|
| |