Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1074 |
Symbol | |
ID | 4070034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 1348840 |
End bp | 1349823 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637983083 |
Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
Protein accession | YP_590151 |
Protein GI | 94968103 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0137531 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTGG TCATCGCACT CCCGCACCGG TTTCCGCTCT GGGATGCTCC GCCATGGTTC GCGGAAAAGC TCAGGGCGGA ATTTCCCGGC TTGCGCGTTG TGCAGATGGC CGGCTATGCG ACGCTCGAGC AGGAAATCTC AGACGCCGAT ATCGCACTTA CCCGCGAATT GAAACCCAGT CAGGTTCACG CTGCGAAGCA ACTCAAGTGG ATCCACTCCG CCGCCGCCGC CGTCCATGCG TTGATGATCC CCGAGATCCG TCAAAGCAAC ATCATCGTCA CCAACGCCAC CGCCGTTCAC GGTCCAGTCG TCGCCGAACA TGCACTTGCC ATGATCCTGG CGATCGCGCG CCGTATTGAT CTCGCCGTCA AAGCACAAAC CGAGCACATC TGGAAGCAGG AGGAGATTTG GGTTACCAAT CCTCCGCCGC GCGATATCGC GGGTTCCACG TTGCTTGTCG TAGGCCTCGG ACAGATCGGC CGTCCCCTCG CGCAGAAAGC AAAAGCACTC GGAATGCACG TGATCGCTGT TCGGGAACAT CCGGAGCGGG GTGCAGAGAC TGCCGACGAA GTCTTCGCGT CGAAAGACCT GCTCAAAATT CTGCCGCGCG CGGATTTCGT CATGCTTTGT CCGCCGGTGA CGCCTGACAC AAAAGAGGCG TTTGGACGCG ACCAACTTGC AGCGATGAAG CCCGACGCCT ATCTTCTCAA CGTCGGTCGT GGTGCTCTGA TAGACGAACC AGCTTTGATT GAGGCTCTCC AACAACGGCG TATCGGAGGC GCAGCGCTCG ATGTCACAAG CGTCGAACCG CTTCCGTCCG ACTCACCGCT CTGGGCGCTC GACAACTGTA TGATTACGCC GCACACCGGC GGAATTTCTC CGAAACTTTG GGAGCGGCAA TACATCTTCT TTACCGAAAA CCTGCGCCGG TTCCTAGCGG GCAAGCCGCT CCTGGGACTG GTAGATAAAT CGAGAGGCTA CTGA
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Protein sequence | MKLVIALPHR FPLWDAPPWF AEKLRAEFPG LRVVQMAGYA TLEQEISDAD IALTRELKPS QVHAAKQLKW IHSAAAAVHA LMIPEIRQSN IIVTNATAVH GPVVAEHALA MILAIARRID LAVKAQTEHI WKQEEIWVTN PPPRDIAGST LLVVGLGQIG RPLAQKAKAL GMHVIAVREH PERGAETADE VFASKDLLKI LPRADFVMLC PPVTPDTKEA FGRDQLAAMK PDAYLLNVGR GALIDEPALI EALQQRRIGG AALDVTSVEP LPSDSPLWAL DNCMITPHTG GISPKLWERQ YIFFTENLRR FLAGKPLLGL VDKSRGY
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