| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1068 |
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| Symbol | |
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| ID | 4068717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 1340088 |
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| End bp | 1343267 |
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| Gene Length | 3180 bp |
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| Protein Length | 1059 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637983076 |
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| Product | hydrophobe/amphiphile efflux-1 HAE1 |
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| Protein accession | YP_590145 |
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| Protein GI | 94968097 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.186507 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTTGACT TCTTTATCAA GCGCCCCATT TTCGCGACCG TATGTGCGTT GCTGATTATC
CTGGCGGGCG CGGTTTGCAT CCCGACGTTG CCGATCTCGC TGTATCCCGA GCTTGCTCCC
CCACAGGTTA CTGTGACGAG CAATTACGTC GGCGCGAACG CTCAAGTGGT GGAGTCTGCG
GTCACCACTC CGCTTGAACA GCAGATCAAC GGTGTGGAGG GCATGCACTA CATCTCGTCC
ACCAGTTCCA ACGACGGCAC CAGCAGCATC AACGTCACGT TTCGTACCGG GTACGACTTA
AACATCGCCG CCGTCGACGT GCAGAACCGC GTCGCGGCTG CGCAAGGACG GCTCCCGCAG
GAAATCAAAA ACACTGGCGT TACCATCACG AAGGCGAATC CGAACTTCGT TTTTGCCGCC
GGTTTTTACT CGCCCGACAA CACTCTTTCC AACCAATACA TTTCGAACTA TCTCGACGTT
TACGTGAAAG ATGCGCTCAA GCGAATCCAG GGCGTGGGCG ATGTAGTGAT CTTCGGCGAA
CGCAAGTACG CCATGCGCAT CTGGCTCGAT CCCACGAAGC TCGCCGCGCG CCAACTCACG
GCTGCTGACG TCGTAGCGGC GCTCCAGGAG CAGAACGTCG AAATTCCAGC TGGACAACTC
GGGCGTCCGC CGGCAGATCC CAAGCAGAAC TTCCAGGTCA CGCTACGCGC TGTTGGACGG
CTCTCTGACC CGCGAGAGTT CGAAGACATC ATCCTCAAGA GCACCAAGAA CGGAATCGTT
CAACTCAAGG ACGTTGGCCA TGCGGAAGTC GGCGCCGAGA ATTACGATAC CAACCTGCTC
TACAGCGGAC ACGAGGCGAT CGGTATCGGT GTACAGCAGC TATCGAACGC GAATGCGCTT
GAAGTCGACA AAGCGGCCAA AGCCGAACTG GCTGAGCTCT CCAAGTCTTT TCCTCCCGGC
ATCAAGTACG TGGTTGCCTT TGACACGACG ACCGTGGTTG GCGATTCCGT AAAAGAGGTC
ATCACCACAC TCGAAGAAGC AGTGTTGATC GTCATCATCG TGATCTTCCT CTTCCTTCTC
GATTGGCGCG CAACGATCAT TCCGGCGGTC ACGATCCCGG TTTCCTTGAT TGGCACATTT
GCCTTCATCA AGATGTTCGG GTTCTCGATC AACTCGCTCA CGTTGTTCGG CATTACTTTG
GCGACGGGGT TGGTGGTCGA CGACGCTATC GTCGTCATCG AAAACGCCCA GCGGCACATC
AACCAAGACC ATACCGATCC ACATCGCGCA ACCTCGGTCG CTATGGCGGA GGTATCCAGC
GCCGTAGTTG CAACATCGCT GGTTCTGATC TCAGTCTTTG TCCCGGTATC GTTTTTCCCC
GGCACCACCG GTATTCTCTA CCGCCAGTTC TCGCTGACTA TCGCTTTCTC AATCGCGATA
TCCCTATTCA ACGCGCTCAC GCTCTCGCCG GCATTGGCGG CCATCTTGTT GCGCAGCGAA
GAGAAGAAGT ACGGCATGCT CGATTGGACG CGGAGCAAAA CCATCTCGGG TGGCTATCGC
AAAATCGCGC ACGGGATTGA CGACGCCATC CACGGCCTGG GTGCGTGGTA TGGAAAAGTT
ATTGGAACAG TCTTGCGCTT GCGCTACGTG ATGCTGGCAC TCTTTGTGGC TGGTCTCGTG
GCCACCGGAT ACATGTACGT CCACGTGCCT ACGGGTTTCG TTCCGCAGGA AGACCAGAAC
TATTTCATTA CCGTCGTGCA GGCTCCGCAG GGTGCCTCGC TCGCGTACAC GACGTCGATC
GCCAAGCAGG CAGAGCAGAT CCTGCGCGCC GATCCAGATG TCTTTGGCAC CTTCGCGGTA
CCTGGTTTCT CTCTGACCGG AGGTAGTTCG TCCAACTACG GTCTGATCTT TGCGCCTCTG
AAGCCGATCG ACGAGCGCAA GGGCAAGGGC CATGCTGCAA GCGACATCGT GGCGAGGATA
GGACCAAAGC TTTTCTCGGT TCCGGGCGCG ATTATCGTTC CCTTCGAACC TCCCGCCATC
CAAGGTATCG GTAGCTTTGG CGGATTCCAG TTCCAATTGC AGGACCTCGG CCGCAACACG
CTGCAGGATC TCGACGTTGT CGCGCACAAG ATCATCGGGG CTAGTCGTCA GCGGCAGGAC
CTGGCGGGAT TGTTCACGAG CTATACGGCG AACGATCCCC AGGAACTCGT TGAGATCGAT
CGCCAGAAGG CAAAGGCCAT GGGCGTGCCG ATCAGCCAGA TCACCCAGGC TCTGGGCGTG
TATATGGGGT CGGAGTATGT GAACGACTTC GATTTCAACA ATCGGTCCTA CCGCGTTTAC
GTCCAGGCCG ATCAACCGTT CCGCATGACG GCACGCGACA TTCGTCAATA TTATGTGCGC
TCTGACACCA ACGGTCTCGT ACCTCTTGAA AACATCGTCA CGCTGAAAGA AACCTCCGGC
CCGCAGGTCA TCAATCACTT CAACCTGTTC CGGTCCGCCG AAATCGATGG CGCTCCGGCT
CCGGGCTTTA GCTCCAGCCA CGGACTGGAA GCAATGCAGG AACTCGCGCA TCAGAACATG
ATCCAGGGCA TGTCATTCCA ATGGAGCGGC CTTGCGCTGG AAGAAGTCGA AGCTGGCGGC
AAAGCGATCC TCATCTTCGC GCTCGGCATT CTCGTGGTGT ATCTCACGCT TTCCGCGCAA
TACGAGAGCT TCGCGTTGCC ATTCATCATT CTGCTGGCGG TTCCGACTGC TGTGCTGGGG
GCGTTGTCGT TTATCTCTTT ACGCGGATTG GTGAACGATG TCTACGTACA AATCGGGCTG
GTGATGCTCA TTGGCCTTTC GGCGAAAAAT TCAATTTTGA TCGTCGAGTT TGCCGAGCAG
CTCATCGAGC AAGGTCGCTC GATCACCGAA GCCGCGATCG AGGCCGGCGA ATTGCGCCTG
CGCCCAATTC TGATGACGTC GTTCGCGTTC ATCCTCGGAG TTCTCCCGCT CTACTTCGCC
ACCGGTGCCG GGAAAATCGG TCGTCACTCG GTGGGCACAG CGATCGTGGG CGGCATGCTC
TTCTCGACAG TACTGAACTT GATCTTCATC CCAGTGCTGT ACGTCATCGT GAAGACACTC
TTAGGAGCAC GCACGTCCGG AGTAGCTCTC GAAGCAGAGG AAGTGGAAGA GGCGGCTTAG
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| Protein sequence | MVDFFIKRPI FATVCALLII LAGAVCIPTL PISLYPELAP PQVTVTSNYV GANAQVVESA
VTTPLEQQIN GVEGMHYISS TSSNDGTSSI NVTFRTGYDL NIAAVDVQNR VAAAQGRLPQ
EIKNTGVTIT KANPNFVFAA GFYSPDNTLS NQYISNYLDV YVKDALKRIQ GVGDVVIFGE
RKYAMRIWLD PTKLAARQLT AADVVAALQE QNVEIPAGQL GRPPADPKQN FQVTLRAVGR
LSDPREFEDI ILKSTKNGIV QLKDVGHAEV GAENYDTNLL YSGHEAIGIG VQQLSNANAL
EVDKAAKAEL AELSKSFPPG IKYVVAFDTT TVVGDSVKEV ITTLEEAVLI VIIVIFLFLL
DWRATIIPAV TIPVSLIGTF AFIKMFGFSI NSLTLFGITL ATGLVVDDAI VVIENAQRHI
NQDHTDPHRA TSVAMAEVSS AVVATSLVLI SVFVPVSFFP GTTGILYRQF SLTIAFSIAI
SLFNALTLSP ALAAILLRSE EKKYGMLDWT RSKTISGGYR KIAHGIDDAI HGLGAWYGKV
IGTVLRLRYV MLALFVAGLV ATGYMYVHVP TGFVPQEDQN YFITVVQAPQ GASLAYTTSI
AKQAEQILRA DPDVFGTFAV PGFSLTGGSS SNYGLIFAPL KPIDERKGKG HAASDIVARI
GPKLFSVPGA IIVPFEPPAI QGIGSFGGFQ FQLQDLGRNT LQDLDVVAHK IIGASRQRQD
LAGLFTSYTA NDPQELVEID RQKAKAMGVP ISQITQALGV YMGSEYVNDF DFNNRSYRVY
VQADQPFRMT ARDIRQYYVR SDTNGLVPLE NIVTLKETSG PQVINHFNLF RSAEIDGAPA
PGFSSSHGLE AMQELAHQNM IQGMSFQWSG LALEEVEAGG KAILIFALGI LVVYLTLSAQ
YESFALPFII LLAVPTAVLG ALSFISLRGL VNDVYVQIGL VMLIGLSAKN SILIVEFAEQ
LIEQGRSITE AAIEAGELRL RPILMTSFAF ILGVLPLYFA TGAGKIGRHS VGTAIVGGML
FSTVLNLIFI PVLYVIVKTL LGARTSGVAL EAEEVEEAA
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