| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1067 |
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| Symbol | |
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| ID | 4068716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 1338934 |
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| End bp | 1340028 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637983075 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_590144 |
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| Protein GI | 94968096 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.133207 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGGAT TAAGAAAACT GTCGGTCCTA TTGGCTTTTG CTTTTGCAGC ACTGTGCCTT
TTGACGAATG TCGCCTGCAC CAGTACTGAA GCGAAGCAGC CTGCGCCACA AGCACTTCCC
GTGAAAACCA GTTCAATTCA GCTGCAGCAG GTGCCGCAAG TGGGCGAATT CGTAGCGACC
GTGAAATCGC GGCGTTCCGC CAGCATTCAA CCGCAAGTGG ATGGCTCGCT GACAAGAATC
CTGGTGAAGT CCGGGGACAG CGTGCGCGCC GGACAAGTCC TGATGACGAT CGATCCGCTG
AAGCAACAGG CGACCGTTGA CCAGCAGCGC AGCACCGAGG CCCAGAAAAA GGCCACGCTC
GATTACAACG AGCGCGAACT GGAGCGCCAG AAGGCCCTGT TTGAATCGGG CGTGACCAGC
AAACGCGATT ATGAAATTGC GCTGCAGAAC TATCAGAACT CCAAGGCTGA CTGGGAAGCC
TCGACGGCAG CTCGCGTCAC CCAGCAGCGG CAGCTCGCGT ATTACAACCT GACTGCGCCT
TTCGCCGGGA TCGTGGGCGA TATTCCCGTT CACATTGGCG ATTACGTTTC GCCCCAAACG
CTGCTTACAA CGGTGGATGA GAACGCGGAA CTCGAGGCCT ACATCTACAT CCCAACCGAC
CGCACTGCCG ACATCCGCAT GGGTTTGCCC GTGCAAATCG TTACCAGCAA GGGAGAACTC
ATCGAAGCAA CCAAGGTGGA TTTCATCTCG CCCCAAGTGG ATAACGCATT GCAGGGCATC
CTGGTGAAAG CTCCTCTTCA CGGTTCGTTG GAAAAGTTCC GTAATGCCCA GCTGATCAAG
GCGCGCGTGG TGTGGAACAC TTCGCCAACT CCCACAGTTC CTGTGCTTGC GGTCACGCGG
ATCGGCGGCC AGCCGTTCGT CTATGTCGCA GCACAGACGG ACAAGGGAAC TGTCGCGAAA
CAACGCTCGG TTGTATTGGG CGACACCGTT GGGAATGACT ACGCGGTTAC GAGTGGTCTG
CAACCCGGCG ACAAAGTGAT CGTCTCTGGG ATCCAGTTCC TCGCAGACGG CGTACCGGTG
CAACCGATCA GTTAG
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| Protein sequence | MAGLRKLSVL LAFAFAALCL LTNVACTSTE AKQPAPQALP VKTSSIQLQQ VPQVGEFVAT
VKSRRSASIQ PQVDGSLTRI LVKSGDSVRA GQVLMTIDPL KQQATVDQQR STEAQKKATL
DYNERELERQ KALFESGVTS KRDYEIALQN YQNSKADWEA STAARVTQQR QLAYYNLTAP
FAGIVGDIPV HIGDYVSPQT LLTTVDENAE LEAYIYIPTD RTADIRMGLP VQIVTSKGEL
IEATKVDFIS PQVDNALQGI LVKAPLHGSL EKFRNAQLIK ARVVWNTSPT PTVPVLAVTR
IGGQPFVYVA AQTDKGTVAK QRSVVLGDTV GNDYAVTSGL QPGDKVIVSG IQFLADGVPV
QPIS
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