| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1065 |
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| Symbol | |
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| ID | 4068714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 1332103 |
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| End bp | 1334775 |
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| Gene Length | 2673 bp |
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| Protein Length | 890 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637983073 |
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| Product | penicillin-binding protein 1A |
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| Protein accession | YP_590142 |
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| Protein GI | 94968094 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02071] penicillin-binding protein 1B
[TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.375339 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.670591 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTATCA AAATCAAAAT CCCCAGCTTT TCCACCCTGA AGCGCTTGTC TGCCAGTAAG
GGCAAGTCTC GCTCGCAGGC ATCTGCAGAA GGATGGCGGC GCTACGAACG CGAAATCCGC
CTCGGCGTCG CGGCGTTCAT TGTTGTCTGC ATCGTATTCT TCTCGGTCTT CACGTATTAC
TACGTCAAGT ACCAGCGCAT CGTCGATCGC CGCATGAGCG GGCAGATCTT CGCTCCTTCC
GCGAAGATCT ATGCGCGTCC GGTCGAACTC GATGTGGGGG ATCGAGCATC CGTCAGCGAG
ATTGCCGCGG ACCTGCGTCG ATCGGGGTAC TCCGATGACG CGAAGGGTAC CGATTTCGGG
CGCTTTGAAT TGCGCCACGG CGGAATCGAA ATTTATCCCG GGCCGCAGTC GTACCACAGC
TCTGATTCCG CGACCATCTA CATTGCCGAT GGCAAAGTTT CGCGCATTGC CGGTGGAAAC
GGCGGCGACC TTTCAGCTTA CGAACTCGAA CCGCAACTCG TGACCGCGCT TTTCCAGGGA
GAAGATCGGT CGAAGCGGCA GATCGTGAAG TTCAACGAGA TACCTAAGGT GATGGTGGAT
GCTGTTCTCG CCATCGAAGA CCGGCGTTTC TTCCAGCACG GCGGCGTGAA TTATTACCGC
CTTGCGGAAG CGGGGATCAC TGACGTCTTG CATCATCACC GGGGCCAAGG TGGCTCAACG
CTGACGATGC AGCTTTCTCG CGGGTTCTTC CTGACACCAG AGAAGACGAT GAAGAGGAAG
TTCACTGAGA TGCTCATCGC TATTGAGCTT GAGCAGCGCT TCAGCAAGCA ACAGATTTTC
GAACTGTATG CCAACCAAGT TCCGATGGGA CAGCGCGGTT CCTACGGCAT CAGCGGCTTT
GGTGAAGCTG CACGCGCGTA CTTCAATAAG GACATCAAGA ACCTCACTTT GCCGGAAGCC
GCGTTGCTCG CCGGACTCAT TCAGCGTCCA AGTTATCTTT CGCCTTATCG CCACCCGGAG
CGCGCACTCG ATCGCCGCAA CCTGGTACTG GATTCGATGG TTGAGACCGG CACCATTACG
CGCGACGAGG CTGACAAGGC AAAGGCGACG CCCCTGAAGC TCGCCGCGCC AAACGTGGAA
GCCAGCGATG CTCCTTACTT CGTCGACATG GTGAAGGACT TCCTGGGATC GAAGTATGGC
GAAACCGACA TCAACGAGAA CCAGTACCGG ATCTACACCT CGATTGATCC CGAGTTGCAA
AAGGCCGCGG CTGAAGCGGT GGAAGTCGGC ATCAAAGGCG TTGACGAGCA GGTGTTGAAG
GCGCGTACGA AGAAGGTGAA AGTCGGGACA GGGAAGAACG CGAAGACGGA CACCGAAGTG
AAGCCGGGAC CGGAAGCCCA GGTGGCGCTC GTCGCGATTG ATCCGCACAC GGGCGAGGTG
CTGGCTCTGG TCGGCGGACG CAACTATGGC ATGAGCCAAT TGAATCACGC GATCGCCAAG
CGTCCGACTG GTTCGATCTT CAAGCCCTTT GTTTATGCGG CTGCGATGAA TACCGCGATC
ACCGGCGATC CTGCGCAGGC AGTTACGCCG GCATCGCTGG TGGACGATTC GCCGACGACA
TTCATGTATG GCGACCAGAT TTACGAGCCG CGTAACTACA AAGCCGAGTA TCACGGTCAG
GTCACCGCGC GCTATGCACT GGCGATGTCG TTGAACAACG CGACGGTGAA ACTTGCCGAG
CAGGTTGGGT ATGACAACGT CGCGAACCTC GCGAAGAACG CCGGTATCGT CAGCGTAAAG
GCGACGCCCG CCATGGCGCT CGGCGCCTAT GACGCGACTC CACTTGAAAT GGCGGGCGCG
TATACGGTAT TCGCCAACGG CGGCGTGCGT CTTTCGCCGA CACTGGTAAA GAGCGTGCGC
ACGACGAAGG GCGATGTCGT AGACAACTTC CAGGCCGAGA GCCGCAATGT TCTCGATCCG
CGCGTAGCGG CTGTCCTGAC AGACATGCTG CAAGGACCGG TGAATTATGG CACCGGCTAC
ACGGTCCGCC AGCGGGGATT TACGGCGCCC GCGGCAGGGA AGACCGGCAC TTCACACGAT
GCCTGGTTCG CCGGCTACAC CAGCAATCTT CTCTGCATTG TCTGGGTTGG ATTCGACGAC
TATAGCGACA TCAAACTTTC GGGTGCCGTC GCTGCCGCGC CTGTCTGGGC GGAATTTATG
AAACGCGCTC AGAAGATTTC TCAGTACGAG GACATGAAGG GCTTCGGGCA GCCGTCGGGC
GTGGTTTCAG TGGAACTCGA CAAAGTGACC AACGATCTCG CGACGCCGTC GTGCCCGGAG
ACCTACACCG CATCGTTCGT CGCCGGAACA GAGCCGAAAG AAACCTGCGA TCAAGCACTC
GGAGACCACC GCGGCATACT GTCGAAAATC TTCGGAGGAA GCGGCCAGCA AACCGTGTTG
CCACCACCCA CGACCAACGG GCCCGTGAAC AACATGCCGC CTGCGCAAAC GACCACTTCC
GCGCAGCAGC AACAACAGGA TCAGAACAAA AAGAAGAAGG GATTCTTCGG CAAGATTGCA
GGGTTCTTCA AGAGCGATGG CAGCGATGGT CAACAGTCGC AGCAGCAGAA CCAAACCGAT
CCAAACAATA ATGGAAGTGC CAGTCCGCAT TAA
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| Protein sequence | MAIKIKIPSF STLKRLSASK GKSRSQASAE GWRRYEREIR LGVAAFIVVC IVFFSVFTYY
YVKYQRIVDR RMSGQIFAPS AKIYARPVEL DVGDRASVSE IAADLRRSGY SDDAKGTDFG
RFELRHGGIE IYPGPQSYHS SDSATIYIAD GKVSRIAGGN GGDLSAYELE PQLVTALFQG
EDRSKRQIVK FNEIPKVMVD AVLAIEDRRF FQHGGVNYYR LAEAGITDVL HHHRGQGGST
LTMQLSRGFF LTPEKTMKRK FTEMLIAIEL EQRFSKQQIF ELYANQVPMG QRGSYGISGF
GEAARAYFNK DIKNLTLPEA ALLAGLIQRP SYLSPYRHPE RALDRRNLVL DSMVETGTIT
RDEADKAKAT PLKLAAPNVE ASDAPYFVDM VKDFLGSKYG ETDINENQYR IYTSIDPELQ
KAAAEAVEVG IKGVDEQVLK ARTKKVKVGT GKNAKTDTEV KPGPEAQVAL VAIDPHTGEV
LALVGGRNYG MSQLNHAIAK RPTGSIFKPF VYAAAMNTAI TGDPAQAVTP ASLVDDSPTT
FMYGDQIYEP RNYKAEYHGQ VTARYALAMS LNNATVKLAE QVGYDNVANL AKNAGIVSVK
ATPAMALGAY DATPLEMAGA YTVFANGGVR LSPTLVKSVR TTKGDVVDNF QAESRNVLDP
RVAAVLTDML QGPVNYGTGY TVRQRGFTAP AAGKTGTSHD AWFAGYTSNL LCIVWVGFDD
YSDIKLSGAV AAAPVWAEFM KRAQKISQYE DMKGFGQPSG VVSVELDKVT NDLATPSCPE
TYTASFVAGT EPKETCDQAL GDHRGILSKI FGGSGQQTVL PPPTTNGPVN NMPPAQTTTS
AQQQQQDQNK KKKGFFGKIA GFFKSDGSDG QQSQQQNQTD PNNNGSASPH
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