| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1048 |
|---|
| Symbol | |
|---|
| ID | 4073135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 1313475 |
|---|
| End bp | 1315148 |
|---|
| Gene Length | 1674 bp |
|---|
| Protein Length | 557 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637983055 |
|---|
| Product | urocanate hydratase |
|---|
| Protein accession | YP_590125 |
|---|
| Protein GI | 94968077 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2987] Urocanate hydratase |
|---|
| TIGRFAM ID | [TIGR01228] urocanate hydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.155699 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGTTG ATACCGAAAC ATCTAGCTAT ACTCCCGTCA AAGCGCCACG TGGTAACACC
ATTTCCTGCA AGGGCTGGCA GCAAGAAGCT GCCATGCGCA TGCTCATGAA CAACCTCGAC
GAAGAGGTAG CCGAGCGCCC TCGCGACCTG GTTGTGTATG GGGGCACCGG CCGCGCAGCC
CGCAGTTGGG ACTGCTTCCA CGCCATCGTG AACACGCTTA AGTCTCTCGA CAACGACGAG
ACTCTGCTGG TGCAATCCGG GAAGCCGGTT GCGGTGTTCC GGACGCACGA ATATGCGCCG
CGTGTGCTCA TCTGCAACTC GAACCTTGTC GGGCATTGGT CGAATTGGGA CAAGTTCAAC
GAGCTCGAAC GTGCCGGTTT GACGATGTAT GGCCAGATGA CCGCCGGCTC GTGGATCTAC
ATCGGATCGC AGGGCATCAT CCAGGGCACT TTTGAGACAT TTGCTGCCGC GGCCGAGAAG
CACTTCGGTG GTGAACTTGA AGGGAAGCTG ATTGTGAGCG GCGGTATGGG AGGCATGGGT
GGCGCTCAGC CACTGGCAGC AACCATGACC GGCGCGTGCT TCCTTGGCAT TGATGTTGAT
CCCGAGCGCA TCAAGAAGCG CCTGAAGACG GGCTACTGCG ACTTCATGGT CAACTCGCTT
GACGAAGCGC TCCGCATCCT GAAGAACGCC GTTCGCAAAA AAGAGAACAT TTCTGTCGGT
CTTGTCGGCA ACTGCGCCGA TGTGATTCCG GAACTAGCCG AGCGCGGCGT GGTGCCCGAC
ATCCTTACCG ACCAGACGTC GGCGCATGAT CCGCTGAACG GGTACGTTCC GAATGGCATG
ACGTTCGAAG CAGCGCTGGA GCTTCGCAAG AGCGATCCGC ATGCGTACAA CGAGCGTTCG
CTGGATTCAA TGGCGCGCCA CGTCGAGGGC ATGCTCAAGC TGCAGAAAAT GGGCGCTGTC
ACCTTTGACT ACGGCAACAA CATTCGGACG TTCGCCTTCC AGCGCGGCGT TAAGAACGCG
TACGACTTCC CGGGTTTTGT GCCGGCGTAC ATTCGTCCTC TGTTTTGCGA AGGCCGCGGA
CCGTTCCGCT GGGTAGCGCT CTCGGGTGAG CCGTCGGACA TTCATGTGAC GGACGAGCTG
ATCCTTCAGA TGTATCCGCA GAACCGCATT CTGAGCCGCT GGATCGATCT TGCGCGCAAG
CGGATCAAGT TCCAGGGACT GCCGTCGCGC ATCTGCTGGC TCGGCTATGG CGAGCGCGCC
GAGTTCGGGC TCGCAATGAA CGACCTCGTA AAGAAAGGGA AGATCAAGGC CCCGATCGTC
ATCGGCCGCG ACCACCTCGA CTGCGGCTCG GTGGCATCGC CGTTCCGCGA AACCGAAGCC
ATGAAAGACG GTAGCGATGC GATCGCCGAT TGGCCGCTGC TCAACGCGCT GCTGAACACT
GCGAGCGGAG CTTCGTGGGT CTCGATTCAC AACGGAGGCG GCGTAGGCAT TGGCTATTCG
CAACACGCCG GCCAGGTGAC AGTCGCCGAC GGAACCGACG AGATGGCGAA GCGCATCGAG
CGGGTGCTTA CTAACGATCC GGGCATTGGT GTGGCACGGC ACGTGGACTC CGGCTACGAC
GAAGCCAAGA GCTTCGCGAA AGAAAAGGGC GTCAAGATTC CGATGGGACA GTAG
|
|---|
| Protein sequence | MPVDTETSSY TPVKAPRGNT ISCKGWQQEA AMRMLMNNLD EEVAERPRDL VVYGGTGRAA
RSWDCFHAIV NTLKSLDNDE TLLVQSGKPV AVFRTHEYAP RVLICNSNLV GHWSNWDKFN
ELERAGLTMY GQMTAGSWIY IGSQGIIQGT FETFAAAAEK HFGGELEGKL IVSGGMGGMG
GAQPLAATMT GACFLGIDVD PERIKKRLKT GYCDFMVNSL DEALRILKNA VRKKENISVG
LVGNCADVIP ELAERGVVPD ILTDQTSAHD PLNGYVPNGM TFEAALELRK SDPHAYNERS
LDSMARHVEG MLKLQKMGAV TFDYGNNIRT FAFQRGVKNA YDFPGFVPAY IRPLFCEGRG
PFRWVALSGE PSDIHVTDEL ILQMYPQNRI LSRWIDLARK RIKFQGLPSR ICWLGYGERA
EFGLAMNDLV KKGKIKAPIV IGRDHLDCGS VASPFRETEA MKDGSDAIAD WPLLNALLNT
ASGASWVSIH NGGGVGIGYS QHAGQVTVAD GTDEMAKRIE RVLTNDPGIG VARHVDSGYD
EAKSFAKEKG VKIPMGQ
|
|---|
| |