Gene Acid345_1045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1045 
Symbol 
ID4073132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp1311115 
End bp1311873 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content58% 
IMG OID637983052 
Producthemolysin A 
Protein accessionYP_590122 
Protein GI94968074 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.285224 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAGTCC GCCTTGACAA GCTTCTGGTA GAACGAGCGC TTGTTCCGTC GCGCGAACGC 
GCCCAAGCCA TGATCCTTGC AGGTCGAGTG CTCGTCAACG AGCAGAAGGT CGAGAAAGCG
GGTGCAAATG TCGAGGATGA TTCCGCCATC CGGCTACTTG GCGATGATCT TCGTTACGTT
GGCCGCGGCG GACTGAAACT TGAGCGCGCG CTGCAGCATT GGAACATTGA GGTTCGCGGA
CGCACTTGCA TGGATATTGG CGCTTCAACC GGTGGCTTTA CCGACTGCTT CCTGCAACAC
GGAGCCGCTC ACGTGATTGC CGTGGATACC GGATTTGGCC AGATTGATGC CAAGTTGCGC
GCCGACGAAC GCGTGCATCT CCTCGAGCTG ACCAACGCTC GCTATCTCAC ACGAGAGCAG
GTTGAGGAAG TTGCTCCCGG AAGAGTGCTG CCGGATATCG CTGCCATGGA CGTGTCGTTT
ATCTCTGCTA CACTCGTGCT TCCGGCGGTA ATAGCGGTGT TGCGCGACGC GCCCAGTGAG
CGAAAGCAGC TGGTGGTGCT GGTAAAACCG CAGTTCGAAG TGGGCCGGGA AAAGATTGGC
AAAGGCGGAA TCGTTCGCGA TGCAGCTGCC CAGCAACTCG CGCTCGAGAA AGTGAAAGAG
TGCGTTGCGG AACTGCGGGG CCGCGGTTTG GACACCATCG AATCCCCGAT CCTGGGAGCG
GAAGGCAACC GCGAGTTCCT ACTGTACGCT GAGCTATAA
 
Protein sequence
MKVRLDKLLV ERALVPSRER AQAMILAGRV LVNEQKVEKA GANVEDDSAI RLLGDDLRYV 
GRGGLKLERA LQHWNIEVRG RTCMDIGAST GGFTDCFLQH GAAHVIAVDT GFGQIDAKLR
ADERVHLLEL TNARYLTREQ VEEVAPGRVL PDIAAMDVSF ISATLVLPAV IAVLRDAPSE
RKQLVVLVKP QFEVGREKIG KGGIVRDAAA QQLALEKVKE CVAELRGRGL DTIESPILGA
EGNREFLLYA EL