Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1045 |
Symbol | |
ID | 4073132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 1311115 |
End bp | 1311873 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637983052 |
Product | hemolysin A |
Protein accession | YP_590122 |
Protein GI | 94968074 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1189] Predicted rRNA methylase |
TIGRFAM ID | [TIGR00478] hemolysin TlyA family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.285224 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAGTCC GCCTTGACAA GCTTCTGGTA GAACGAGCGC TTGTTCCGTC GCGCGAACGC GCCCAAGCCA TGATCCTTGC AGGTCGAGTG CTCGTCAACG AGCAGAAGGT CGAGAAAGCG GGTGCAAATG TCGAGGATGA TTCCGCCATC CGGCTACTTG GCGATGATCT TCGTTACGTT GGCCGCGGCG GACTGAAACT TGAGCGCGCG CTGCAGCATT GGAACATTGA GGTTCGCGGA CGCACTTGCA TGGATATTGG CGCTTCAACC GGTGGCTTTA CCGACTGCTT CCTGCAACAC GGAGCCGCTC ACGTGATTGC CGTGGATACC GGATTTGGCC AGATTGATGC CAAGTTGCGC GCCGACGAAC GCGTGCATCT CCTCGAGCTG ACCAACGCTC GCTATCTCAC ACGAGAGCAG GTTGAGGAAG TTGCTCCCGG AAGAGTGCTG CCGGATATCG CTGCCATGGA CGTGTCGTTT ATCTCTGCTA CACTCGTGCT TCCGGCGGTA ATAGCGGTGT TGCGCGACGC GCCCAGTGAG CGAAAGCAGC TGGTGGTGCT GGTAAAACCG CAGTTCGAAG TGGGCCGGGA AAAGATTGGC AAAGGCGGAA TCGTTCGCGA TGCAGCTGCC CAGCAACTCG CGCTCGAGAA AGTGAAAGAG TGCGTTGCGG AACTGCGGGG CCGCGGTTTG GACACCATCG AATCCCCGAT CCTGGGAGCG GAAGGCAACC GCGAGTTCCT ACTGTACGCT GAGCTATAA
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Protein sequence | MKVRLDKLLV ERALVPSRER AQAMILAGRV LVNEQKVEKA GANVEDDSAI RLLGDDLRYV GRGGLKLERA LQHWNIEVRG RTCMDIGAST GGFTDCFLQH GAAHVIAVDT GFGQIDAKLR ADERVHLLEL TNARYLTREQ VEEVAPGRVL PDIAAMDVSF ISATLVLPAV IAVLRDAPSE RKQLVVLVKP QFEVGREKIG KGGIVRDAAA QQLALEKVKE CVAELRGRGL DTIESPILGA EGNREFLLYA EL
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