Gene Acid345_1042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1042 
Symbol 
ID4073129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp1307905 
End bp1308588 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content58% 
IMG OID637983049 
Producthypothetical protein 
Protein accessionYP_590119 
Protein GI94968071 
COG category[R] General function prediction only 
COG ID[COG2945] Predicted hydrolase of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.118835 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGATGA CGACCCATTC CACCCCAAAT GCGCAAATCC GTTCGTTCTT TCTCGAAGGG 
CCGGCAGGGC GTCTGGAAGC GCTGCTGAAC GCAGGCAAGC CGGATGCGCA ATTCGCGGCG
GTAGTGTGCC ATCCGCACCC GTTGTACGGC GGCACCATGC ACAACAAGGT GGTGTACAAC
GCCATGAAGG CGCTGCGCGG TTTCGGATTC CCAGTGCTGC GTTTCAACTT TCGAGGGACC
GAACTGAGCG AGGGCGAACA CGATTACGGC GCAGGTGAGC GCCAGGATGT CCAGACGGCC
CTCGAGTGGC TGAAGCACGA ATTTTCGTTG CCCCTGATCT TTGCGGGGTT TTCTTTTGGC
GCTGCGGTTG GTTTGCGGGC TGCCTGTCCT GATCCGGATG TGAAAGCGTT GATCTCGCTG
GGAACACCGG TGGCAGCAGA AGGACGTTCG TACACCTATG AGTTCCTCAA TGAGTGCGCG
AAGCCAAAAT TGTTTGTTAG CGGAGACCGC GATCAGTTTG GGCCTGCGGA AAGGCTGTAC
GAAGTGACCG CAGCCGCGGC AGAGCCGAAA AGGTTCGTGC TCATCCATGG CGCCGATCAT
TTCTTTGCCG GACAACTGGA AAGCATGAAG TCGGCGATTG AGTTCTGGGT GCGCGATACG
CTCCTACAAC CTCAGCGTCA GTAA
 
Protein sequence
MEMTTHSTPN AQIRSFFLEG PAGRLEALLN AGKPDAQFAA VVCHPHPLYG GTMHNKVVYN 
AMKALRGFGF PVLRFNFRGT ELSEGEHDYG AGERQDVQTA LEWLKHEFSL PLIFAGFSFG
AAVGLRAACP DPDVKALISL GTPVAAEGRS YTYEFLNECA KPKLFVSGDR DQFGPAERLY
EVTAAAAEPK RFVLIHGADH FFAGQLESMK SAIEFWVRDT LLQPQRQ